Corylus avellana (European hazelnut): 132181011
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Entry
132181011 CDS
T09426
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132181011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132181011
03036 Chromosome and associated proteins [BR:
cave03036
]
132181011
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
132181011
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
132181011
RSF complex
132181011
WICH complex
132181011
B-WICH complex
132181011
NORC complex
132181011
BRF complex
132181011
NuRF complex (fruit fly)
132181011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
DEAD
DBINO
HDA2-3
YnfE
CHDII_SANT-like
AAA_14
Motif
Other DBs
NCBI-GeneID:
132181011
NCBI-ProteinID:
XP_059450035
LinkDB
All DBs
Position
ca1:complement(14398755..14407301)
Genome browser
AA seq
1070 aa
AA seq
DB search
MAKPSKRQASSDEALSNSSNSSSSEEQVIEQIEDEEDEEELEAVARSAGSDEDDDNSPAS
QDAAADGDEEDEDGNNVSNAEISKRERARLKEMQKMKREKIQEILDVQNAAIEADMNNRG
QGRLKYLLQQTELFAHFAKGDHSASLKKTKGRGRHASKITEEEEDEECLKEEEDGLSGTG
TTRLLSQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEF
RGITGPHMVVAPKSTLGNWMNEIRRFCPTLRAVKFLGNPDERRHIRDNLLVAGKFDVCVT
SFEMAIKEKTSLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLH
ELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP
PKKETILKVGMSQMQKHFYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAE
PGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYC
RIDGNTGGEDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDL
QAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDE
LLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAE
LYDFADEKDENKVDFKKLVSDNWIEPPKRERKRNYSESEYFKQTMRQGGPAKPREPRIPR
MPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKDTIDVDEPEEVGDPLTAEELEEKE
RLLEEGFSSWSRRDFNTFIRACEKYGRNDIKSIASEMEGKTEEEVERYAKVFKERYKELN
DYDRIVKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFM
ICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDER
ERQARKEKKLAKSMTPSKRALARQTESPISLKKRKQLTMDDYVSTGKRRK
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccctccaagcgacaggcgtcgtccgatgaggccctatccaacagctccaat
tcgtcgtcgtcggaggagcaggtcatcgagcagatcgaagacgaggaggacgaggaggag
ctcgaggccgtggctcgctcagccggttccgacgaagacgacgacaactcgcccgcctcc
caggacgctgccgccgatggcgacgaggaggacgaggatggaaataatgtgtccaatgcc
gaaataagcaagcgagaaagggccagactcaaagaaatgcagaaaatgaagagagaaaag
attcaggaaatactggacgtccaaaatgctgcaattgaagctgatatgaacaataggggg
caggggcgcttgaagtatctcctgcagcaaactgagttgtttgcgcactttgccaaaggt
gatcattctgcatctttaaagaagacaaagggaaggggtcgccatgcatcaaaaataact
gaagaggaagaagatgaagaatgtcttaaggaggaagaggatggtttgtctgggacagga
accacacggcttcttagtcaaccctcttgtattcaggggaagatgagggactaccaactt
gctgggttaaactggcttatacgactatatgagaatggtataaacggaatccttgcagat
gaaatggggcttggtaaaacattgcaaaccatctctttattgggctatttgcatgagttc
agaggaattactggccctcatatggtagttgctccaaaatctacccttggaaactggatg
aatgaaatccgacgtttctgcccaactttgcgtgctgtaaagtttcttggaaatcctgat
gaaaggaggcatatacgagacaatttactggttgctggcaagtttgatgtctgtgtcaca
agttttgaaatggcaattaaagagaagaccagcttacgtcgctttagctggcgctatatt
atcattgatgaagcccatcgaattaagaatgagaattcgctcctttcaaaaacaatgagg
ctttataataccaattatcgccttctcatcactggtacaccacttcagaacaatctccat
gaactttggtcccttctcaattttcttctgccagagatatttagttctgcagaaactttt
gacgagtggttccaaatttctggtgaaaatgatcagcaggaagttgtccaacagcttcat
aaggtactccgtccttttctcctccgaaggttgaagtcagatgttgaaaaagggttacct
ccaaagaaggaaacaattcttaaagtgggcatgtcacagatgcagaaacacttttacagg
gctttactgcagaaagatcttgaagttgttaatgctggtggagaacggaagcgtcttttg
aatatagcaatgcagctgcgtaaatgctgtaaccatccatatctttttcaaggtgctgaa
cctggtcctccttataccacaggagatcatcttattacaaatgctggtaaaatggttcta
ttggataagttgcttccaaaactaaaagaacgtgactctagggtcctgatattttcacag
atgacaaggctgctggacattcttgaagattatttaatgtttcgtggatacctatattgt
cggattgatgggaatactggtggagaagatcgtgatgcttccattgatgcttttaataaa
ccagggagtgagaaatttgttttcttactatcaactagagctggaggccttggcattaat
cttgctacggcagatgttgtcattctttatgacagtgactggaatccacaagttgatttg
caagcacaggaccgtgctcacaggattggtcaaaagaaagaagttcaagttttccggttc
tgcacggagtatactattgaggaaaaagtgattgagagggcttataaaaagcttgcactt
gatgctttggtgattcagcaaggacgattagcagagcagaagactgttaataaagatgag
ctacttcagatggtgaggtttggtgctgaaatggttttcagttccaaggatagtacaatt
acagatgaggacattgacagaattattgcaaaaggagaagaggctactgctgagcttgat
gccaagatgaagaaatttacagaagatgcaatcaaatttaaaatggatgacactgctgaa
ttgtatgattttgctgacgagaaggatgagaacaaggttgacttcaagaaacttgttagc
gataactggattgaaccacccaagagagagcggaagcggaattactctgaatctgaatac
tttaagcaaacaatgcgccaaggtggtccagcaaaaccgagagagcctcgaattcctcgg
atgcctcaattacatgatttccagttctttaacacacaaaggctaagtgagctgtatgaa
aaggaagtacgttatctgatgcaaacacatcaaaagaatcagttgaaagacacaatagat
gtggatgaacctgaagaggtgggagatccattaactgctgaagagctggaagagaaggag
cggctattagaagaggggttttcttcatggagtagaagagattttaatactttcattagg
gcttgtgagaagtatggccgaaatgacatcaaaagtattgcttctgagatggaagggaaa
acagaggaggaagttgaaagatatgcaaaagtttttaaagaaagatacaaagagttaaac
gattatgataggatcgttaagaatatcgaaagaggggaagctagaatttctcgtaaagat
gagatcatgaaagctattgggaagaagttggaccggtacaagaatccatggctggaactc
aagattcagtatggtcagaacaaagggaagctgtacaatgaagaatgtgatcgtttcatg
atatgcatggttcacaaactcgggtatgggaactgggatgagttgaaggcagcatttcgt
acttcacccttgtttcgttttgattggtttgtaaagtctcgcacaactcaagaacttgcg
aggaggtgtgataccctaattcggttggtggagaaggaaaaccaagagtacgacgagagg
gagagacaagccaggaaagagaagaagcttgccaagagcatgacaccatcaaagcgtgct
ctggctcggcagaccgagagccccatttctctaaagaagcggaagcaattaaccatggat
gactatgtgagtacgggaaagcggaggaaatga
DBGET
integrated database retrieval system
