KEGG   Corylus avellana (European hazelnut): 132181049
Entry
132181049         CDS       T09426                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132181049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cave03019]
    132181049
   03041 Spliceosome [BR:cave03041]
    132181049
Messenger RNA biogenesis [BR:cave03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     132181049
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     132181049
Spliceosome [BR:cave03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    132181049
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_Nup35 BRAP2
Other DBs
NCBI-GeneID: 132181049
NCBI-ProteinID: XP_059450075
LinkDB
Position
ca5:532482..536344
AA seq 340 aa
MGSKKNNNLLHGDGSSPGKIFIGGLAKDTSYETFVSYFEKYGKIIDSVIMKDRQTHRPRG
FGFITYEDPSAVEQVIQETHIINGKQVEIKRTVPKGSAQASDFKTKKIFVGGIPTTVTED
EFKNFFSKYGNVVEHEIIRDHVTKRSRGFGFIVFDGEKAVDNMLANGSMIDMEGIQVEVK
KAEPKKASNPAPGPAFGSQSRARSYNDDFGGFGDSYSGFGGGGFGPSSRRSLGGFDGRFG
DYGGYGGGNDFGGGYGSFGGGSFAGYQGESSFGYSGRYGSYMGGLSGGYGGSGLGAYGRG
GGYGSYGGSGSPGANYGGPGGLYGSRAGYSGSSRYHPYAQ
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgggttccaagaagaacaacaacctcctccacggtgacggttccagccctggtaaaatc
ttcattggaggcttagccaaggacaccagctacgaaacctttgtgagctactttgagaag
tatgggaagataatagattctgtgatcatgaaagatcggcaaacgcatcgacccagggga
tttgggttcattacctatgaggatccttctgctgtcgaacaggttatccaagagacccat
atcatcaatggcaagcaggttgagataaaaagaaccgttcctaaaggttccgcacaagct
agcgatttcaaaacaaagaaaatttttgttggtgggattccaactacggtcactgaagac
gagttcaagaatttcttctcaaagtatggaaacgtggtggaacatgagattatacgtgat
catgtgactaaacgctcacgaggctttggatttattgtatttgacggtgaaaaagctgtt
gataatatgctggcaaatggcagtatgattgatatggaaggtatacaggttgaggtcaag
aaggctgaaccaaagaaagcctcaaacccagcacctggtcctgcatttggtagtcaatct
agggcacgctcatacaatgatgattttggtggatttggcgactcttatagtggttttggc
ggtggtggttttggccccagttctcgtaggtcacttggcggttttgatggtagatttggt
gattatggcggatatggaggtggcaatgattttggtggtggttatgggagtttcggtggt
ggtagttttgctggttatcaaggagagtcatcatttggctattccggtcgctatggttcc
tatatgggaggccttagtgggggatatggtgggagtgggttaggtgcatacggacgtggt
gggggctatgggagttatggtggttcaggctcccctggtgctaattacggaggaccagga
ggcttgtatggtagtagggcaggttacagtggcagtagtcgttaccatccttatgcacag
tag

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