KEGG   Corylus avellana (European hazelnut): 132181224
Entry
132181224         CDS       T09426                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03020  RNA polymerase
cave03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132181224
  09124 Replication and repair
   03420 Nucleotide excision repair
    132181224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cave03021]
    132181224
   03400 DNA repair and recombination proteins [BR:cave03400]
    132181224
Transcription machinery [BR:cave03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     132181224
  RNA polymerase III system
   RNA polymerase III
     132181224
  RNA polymerase I system
   RNA polymerase I
     132181224
DNA repair and recombination proteins [BR:cave03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132181224
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 132181224
NCBI-ProteinID: XP_059450325
UniProt: A0ACM5L6V4
LinkDB
Position
ca5:<23896719..23901230
AA seq 143 aa
MADEDYNELDMGYEDEPAEPEIEEGAEEDVENPNNEDVTGEPLETEDKEQQQPVERPRKT
SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
SYEDWGVDELIVEDSWKRQVGGD
NT seq 432 nt   +upstreamnt  +downstreamnt
atggctgacgaagattacaacgaattggacatgggatatgaggatgaaccagcggagcct
gagattgaagaaggtgctgaggaagatgtagagaaccctaacaatgaagacgttactgga
gaaccccttgaaactgaggataaagaacagcagcaaccggtagaacgtcctcgtaagacc
tcaaagtatatgacaaagtatgagcgtgctagaatcttgggtacccgcgctctccagata
agcatgaatgcgcctgtgatggttgagttggagggtgaaactgacccacttgagattgca
atgaaggagcttcgggagcggaagatacccttcaccattcgccgctacctgcctgatgga
agttatgaagactggggagtcgatgaattgattgtggaagactcatggaagaggcaagtg
gggggtgattga

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