Corylus avellana (European hazelnut): 132181355
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Entry
132181355 CDS
T09426
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cave03036
]
132181355
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
132181355
REST complex
132181355
Heterochromatin formation proteins
Other heterochromatin formation proteins
132181355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
132181355
NCBI-ProteinID:
XP_059450520
UniProt:
A0ACM5L4R2
LinkDB
All DBs
Position
ca5:33460577..33470718
Genome browser
AA seq
1394 aa
AA seq
DB search
MKRLKDDVYAGPSQFKRPFGSSRGDSNGQSQVPGGGGGGGGGGGGGGGGGGGSGLGGTSQ
KLTTSDALTYLKEVKDMFQDQREKYDTFLEVMKDFKAQRTDTVGVIARVKELFKGHNRLI
FGFNTFLPKGYEITLDDDEAPPPKKTVEFQEAISFVNKIKKRFQNDEHVYKAFLDILNMY
RKEHKDINEVYSEVATLFDDHPDLLDEFTRFLPDTAHNAPPVQNSFQRLTERSSATPTLR
QMHVDKQRIRRDRIETSHVDRDLSIDHPELDDDKATVKMHKEQRKRAEKDSRDRRNRDQD
DREPDHDNNRDSNLQRFPDKRKSGRKVEGFGINANFPSYDDKDSLKSMCNQGFIFFEKVK
EKLGSSDDYQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYPDLMDGLNDFLERCENIDGF
LAGVINKKSLGSDGHLPRSLKVEERDKEHKRETDGAKEKERSREKYLYKSIQELDLSNCE
RCTPSYRLLPEDYPIPFASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRC
EDDRFELDMLLESVSSAAKRVEELLNSINENNVNLETPFHIEDHFTALNLRCIERLYGDH
GLDVMDILRKNPSVAQPVILTRLKQKQEEWTRCRSDFNKVWAEVYAKNHYKSLDHRSFYF
KQQDSKNLSTRYLVAEIKELKETKQKEDDFLLAIAAGNRQPIVPHMEFEFSDIGIHEDLY
KLVQYSCEEVCSTKEQVNKVMRLWTTFLEPMFGVPPRPHGVEGTEDVGKSKVRPMNCTAS
SIGESDGSPGGDAIIMNSKPPKAAMNENVCRTVANGDLAKENKYLDVDHVRRDDTICNTL
WPEKEQKHIDVTEKFSGLNIQVASGERVANSNASFATGADISHGKISLEVTSGCGATPSR
LSHTVNQDDHVSKANAGAIPSLEEGDGAKPVLLANGVTAEGTNVNRCLEASVRPSKIEKE
EGELSPNGDFEEDNFVVFGDSGELAMPKTKQSRQYHARNGEEINCQDAGGENDVDADDED
SENVSEAGEDVSGSESGGDECSRDEHEEEDVEHDEVDGKAESEGEAEGMVDGHTAGGDGM
LPLSERFLLSVKPLAKHVQASFLDKERKNSRVFYGNDDFFVLFRLHQILYERISSAKMNS
TGAEMKWRTSNDASSTDLYFRFMSSLYNLLDGSADNAKFEDECRAIIGNQSYVLFTLDKL
IYKLVKQLQTVATDEIDNKLLQLYEYEQSRKPGKLIDSVYYENACVLLHEENIYRLECSS
ATSRLSIQLMDSMSQKPEVFAVSMDPNFAAYLYNDYLSVFPGKKEPHGIMLQRNKRKYDS
LDDYSALCTGMDGIDAVNGLECKITCNSSKISYVLDTEDFFFRPRRYRKNSSKETSPCRN
EARVQRFRRFLSSS
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgaagagattaaaagatgacgtttatgctggcccttctcaatttaagcgtccgtttggt
tcttcgcgtggggactccaatgggcaatcccaagtcccagggggtggaggaggaggagga
ggaggaggaggaggaggaggaggaggaggaggaggtagtggtcttggtggtacctcgcag
aaactaacaactagtgatgccttaacctacctcaaggaagtgaaggacatgtttcaagac
caaagggaaaaatatgacactttccttgaggtcatgaaagattttaaggctcaaagaact
gatactgttggtgtcattgcaagagtgaaggaattatttaaagggcataacaggttgatt
tttgggtttaacaccttcttgccgaaggggtatgagataacccttgacgacgatgaggct
cctccaccaaagaagacggttgaatttcaagaagcaatcagctttgtaaacaagataaag
aagcgctttcaaaatgatgaacatgtttataaagcattccttgacattttgaatatgtac
cggaaggagcacaaggacataaatgaggtctacagtgaggttgccacactttttgatgat
catccagatttgctggacgagttcacaagatttctgccggatactgcacataatgctcca
cctgtccaaaactcatttcagcgcctcactgagcgtagctctgccacacccacattgcgg
caaatgcatgtggacaagcaacgaattcggcgggataggattgagacttcccatgtcgat
cgtgatcttagtattgatcatcctgagctagatgatgacaaagcaacagtgaaaatgcac
aaggagcagagaaaacgtgctgagaaggacagcagggataggagaaaccgtgatcaggat
gatagagaacctgatcatgataacaacagagactccaacttgcagcgctttcctgacaaa
agaaaatctggcaggaaggttgaaggatttggaataaatgcaaactttccttcttatgat
gacaaagatagcttaaagagcatgtgcaaccaaggattcattttctttgagaaagttaag
gagaagttgggcagttcagatgactaccaggcattcttgaagtgccttcatatatatagc
aatggaataattaaaaggaatgacttacaaaatctggtgactgatttacttggaaaatat
cctgatcttatggacgggttaaatgatttcttggagcgctgtgagaatattgatgggttt
cttgctggtgttattaacaaaaaatcactgggtagtgatggccatttacccagatcgctg
aaggtagaggagagagataaagaacataagcgcgaaactgatggagctaaagaaaaggaa
agatccagggagaagtatttgtataaatccattcaagagcttgacctctccaattgtgaa
cgttgtacccccagttataggcttctgccagaagactatccaataccttttgcaagccag
aggtcagagcttggtgctcaagtattgaatgatcattgggtatcagtgacttctggaagt
gaggactactcttttaaacatatgcgtagaaatcagtatgaagaaagtctattcagatgc
gaagatgatagatttgagctggatatgttgttagagtctgtcagttcagctgctaagcgc
gtggaggaattgttgaacagcatcaatgaaaataatgtcaatctggagactcctttccat
attgaagatcacttcactgctctaaatctaaggtgtattgaacgtttatatggtgaccat
gggcttgatgtgatggatattttgcgaaaaaatccatctgtagcacagcctgttattcta
actcgcctaaagcaaaagcaagaggagtggacaagatgccgctctgattttaacaaggtt
tgggctgaagtatatgctaaaaatcactataagtcacttgatcaccgcagcttctatttc
aagcaacaagattcgaagaacttgagcacaagatatttggtggctgagatcaaggaattg
aaggagacaaagcaaaaagaggatgattttcttctggctattgctgctggaaacaggcaa
cccatagttccacatatggaatttgaattctctgatatcggcattcatgaagacttgtat
aaacttgtccaatattcatgtgaagaggtttgctcaaccaaagaacaggttaataaggtt
atgagactttggactaccttcttggagccaatgtttggtgttcctcctcggcctcatggt
gtagagggtactgaagatgtaggaaaatctaaggttcgtcctatgaattgtactgcatca
agcataggagaaagtgatggaagtcctggtggtgatgctattataatgaattctaagcca
ccgaaagctgctatgaatgagaatgtttgcaggactgtagcaaatggagacttagctaaa
gaaaataagtatcttgatgtggatcatgtccgtagagatgatacgatttgtaatactctt
tggccagaaaaagagcagaagcatatagatgtgactgagaaattttcaggattaaacata
caagttgcctctggtgaacgagtagccaattcaaatgcgtcatttgcaactggagcagat
attagtcatggcaaaatcagcttggaagtgacttcagggtgtggtgcaactccatccaga
cttagtcacactgtcaatcaagatgaccatgtatccaaagctaatgccggtgctatacct
tcattggaggaaggtgatggtgccaaaccagttttattggcaaatggagtgactgcagaa
ggcaccaatgttaacagatgtcttgaagcatctgttaggccctcaaaaattgaaaaagaa
gagggtgagttatcacctaatggtgattttgaggaagataactttgttgtctttggagat
tctggtgagctggctatgccgaagacaaaacaaagcaggcaataccacgccaggaatgga
gaggagataaattgtcaggatgctggaggagaaaatgatgtggatgctgatgatgaggac
agtgaaaatgtttctgaggctggtgaagatgtctcgggcagcgagtctggtggtgatgag
tgttccagagatgagcatgaagaggaagatgtagaacacgatgaagttgatggcaaggct
gagagtgaaggtgaggctgaggggatggttgatggacatactgctggaggggatggcatg
ctgccattgtcagaacggttccttttgtctgtgaagcctctcgcaaagcatgtgcaagca
tcatttcttgacaaagaaagaaaaaattctcgagttttttatgggaatgacgattttttt
gtactttttaggcttcatcaaatactatatgaaaggatttcatcagcaaaaatgaattca
acgggtgctgaaatgaaatggagaacgtcaaatgatgctagttctacagatctctatttc
agatttatgagttccctgtacaatttgcttgatggatctgctgataatgcaaaatttgag
gatgaatgccgagctatcatcggaaaccagtcatatgtgttattcacattagacaagtta
atctataaattagtaaaacagcttcaaactgttgcgactgatgagattgacaataagctt
cttcaattatacgagtacgaacaatcccggaaacctgggaagttaattgactctgtatac
tatgaaaatgcatgtgtcctccttcatgaggagaacatttatcgtttggaatgttcctct
gccacctcccggctgtccatccagctcatggacagtatgagtcaaaagcctgaggtgttt
gcagtttccatggatcctaattttgcagcttatctatataatgattatctgtcagtcttt
cctgggaaaaaggagccacacggcattatgctgcaaagaaacaagcgaaaatatgacagc
ctagatgattattctgctttatgcacgggcatggatggtattgatgcagtcaatggtttg
gagtgtaagataacttgcaattcgtcgaagatctcctatgttctggacacagaggatttc
ttcttccgtcctagaaggtatagaaaaaattcatcaaaagagacttctccgtgtcgtaac
gaggcaagagtacaacggttccgcagattcttatcatcctcatag
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