Corylus avellana (European hazelnut): 132181879
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Entry
132181879 CDS
T09426
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1 isoform X1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132181879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cave03032
]
132181879
Enzymes [BR:
cave01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
132181879
DNA replication proteins [BR:
cave03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
132181879
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
132181879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
UvrD-helicase
Cas_Cas4
nSTAND3
ResIII
Motif
Other DBs
NCBI-GeneID:
132181879
NCBI-ProteinID:
XP_059451094
LinkDB
All DBs
Position
ca1:42994487..43006513
Genome browser
AA seq
1405 aa
AA seq
DB search
MPPRKKPNSSSSSSSASSSSSKKSNPTNQPQPSKFGIQHFFERHTQNALLASQNPKPASP
SNAAVSTSQNPATDAPRSGPEKSGLPVPSPSSDPENAPNLQKPDSNHKVSASREPEKCLG
SLANDPNNASQNTPSDNIAAMGFSADENLSEVSPEVSKSVSLKRFKFSPGMLIKQSQDDG
GDEVTWKISPVNEKLQAVSKRIPEMMKVLADSSRLNALHLCQCSQNKISPGTAGKVEKWL
SSPSKKADEKSLVSTNRVGLKRVNPDRDMDLYGNENELTSTGVASRQSPFRTPPSLSYCH
DKIANGVACNGASDQLGLRQHKKALLELLDQVEDVISVEDSLSSDMEAYSSKSLDRNDDE
MPVKVDPAVERVAVDLPEEVTGASSNCNFLVLEVSERCRPADSSGTQCPYKVLRLLNEHS
GEERAVYLWEEWFYSVVAPGDTVNVIGEFDDQGKCDIDRDSNFIIVHPDILLSGTRVAGS
FSCPRRTVLDERLKSSEYSTAALIGTLLHQIFQAGLMKEVPTIQFLEEYARVVLQKNIES
LYACGVNENDIQKTLIEAVPKMLNWIITFKDSQVSKAPSVDFGSDDGLKKVNISEVIDIE
EMAWAPKYGLKGMIDASVRVSITSNKNQANEKIMPLEFKTGKVSNGQSSMEHSAQVIFYT
LLMSERYKMHIDRGLLYYLQSDQTQGIVVQRSDLVGLIMRRNELANDILKASTVQQLPPM
IQSLNMCKGCRHLNVCSIYHKAHGGSIETSGLGDVFDSHTSHLTVPHCTFLQRWDRLIDL
EAREIELVKKKIWRSHSLKSDNSTSFLSSLVLDASDELPHQKSHKENRFIYRFVYRDLTS
FNMKASDGHSSTVDTSPTSDMDCTLKSGDYVILSTESGHLTIASGVITEISRFHVFVSFS
KRLRLPGSNPSSEAQNLFREVWRIDKDEFMTSFAVMRFNLVQLFLQSVQSTHLRKIIVDL
EAPKFDSGCIFSQDPAIAYVWSEKNLNDDQRRAILKILTAKDYALILGMPGTGKTSTMVH
AVKALLMRGASILLTSYTNSAVDNLLIKLKAQGIDFVRIGRHEAVHEEVRGHCFSAMNIQ
SVKDVKLRLDQVKVVAVTCLGITSPLLANKRFDVCIMDEAGQTTLPVSLGPLMFASTFVL
VGDHYQLPPLVQSTEARESGMGISLFCRLSEAHPQAISALQSQYRMCQGIMELSNALIYG
DRLRCGSPEVANAKLQFSSLKSCSLWLKEVLNPAKPVIFIDTDMLPAFEAKDKKTLNNPI
EAYIIAEVTEQLVNNGIGGEDIGIITPYNSQANLIRHAVYITSVEIHTIDKYQGRDKDCI
LVSFVRSSENPRDCSSSLLGDWHRINVALTRAKKKMIMVGSCKTLSKVPLLKLLIKKVDE
QSGILSVCKKDISYRGELKRCSQFR
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgaggaaaaagcccaattcttcttcttcctcctcatcagcatcatcatcgtcg
tcaaagaaatccaacccaaccaatcaaccccagccctccaagtttggcatccaacatttc
ttcgagcgccacactcagaacgccctcttagcctcccagaaccccaagcccgcctcccct
tccaacgccgccgtatcgacctcgcaaaatcccgccaccgatgctccgaggtcagggcca
gagaaatcgggtttgcctgttccaagcccgagtagtgatcccgaaaatgcaccgaatttg
caaaaacccgattcgaaccataaggtttcggcgtctcgggagcctgaaaagtgcttgggt
tcgctagcgaatgatccgaataatgcgtcacagaatacgccgtccgacaatatcgcggcg
atgggttttagtgctgatgagaacctgtcggaggtatctccggaggtttccaagtccgtg
tctctcaagcgcttcaagttctcgcctggaatgttgataaagcagagccaggatgatggg
ggtgacgaggtgacatggaagatatctccggtgaacgaaaaactccaggcagtctcgaag
cgcataccggagatgatgaaagtgttggcagactcttcaaggctcaatgctttacacctt
tgtcaatgctctcagaataagatttctcccggtacagctggcaaggttgagaagtggctt
tcatccccgtcaaaaaaggctgatgaaaaatctctggtatccacaaatagggttggcttg
aaaagggttaacccggatcgggatatggatttgtatggaaatgaaaatgaattgactagc
accggagttgctagtagacagagtccattccgaactccgccatctctatcatattgccat
gataagattgctaatggtgttgcatgtaatggagcatctgatcagctgggtttaagacag
cacaaaaaggcattgcttgaacttttggatcaagtagaagatgtcatttctgttgaagac
tcattatctagtgacatggaggcatattcatctaaatctcttgatagaaatgatgatgag
atgcctgtcaaagttgatcctgcagtagaaagagtggctgtggatttaccagaagaggtc
actggagcttcttccaattgtaattttcttgtattggaggtgtctgagaggtgtaggcct
gctgactcatctggtacccaatgcccttataaggttcttcgcctactgaatgaacatagc
ggagaagagcgtgctgtgtatttgtgggaagagtggttttatagtgtagttgcacctgga
gatactgtgaatgtcattggtgaatttgatgaccaaggaaagtgtgacatagatcgtgac
agtaattttataattgttcatcccgacatattgctttctggaacacgggttgctggtagt
ttcagttgccctaggcgaactgttctggatgagaggctaaagtccagtgagtattcaact
gcagcattgattggtaccttgctgcaccaaatttttcaggctggactcatgaaggaagtt
ccaaccatacaattcttggaggaatatgcaagagtggtgctccaaaaaaacattgaaagc
ttatatgcatgtggagtaaatgaaaatgatatacagaaaaccttgattgaggctgtccca
aaaatgttgaattggatcatcacattcaaagactcacaggtttcaaaagctccttctgtg
gattttggatctgatgatgggctgaaaaaagttaacatatctgaggtaattgatattgag
gagatggcatgggcccctaaatatggcttgaaagggatgattgatgcttctgtcagagtc
agtataacatcaaacaaaaatcaagctaatgagaagattatgcctttagagtttaaaact
ggaaaagtatcgaatggccagtcatctatggaacattctgcacaagtaatcttttacact
ctccttatgtctgagaggtacaaaatgcatattgatcgtggtcttctatattatcttcag
tcagatcagacgcagggaattgtggttcaaagatctgatttggttgggctaattatgcgt
cgtaatgaacttgcaaatgatattctcaaggcatcaacagtgcaacaattacccccaatg
atacagagtctgaacatgtgtaaaggttgtcgccatcttaatgtttgtagcatctatcat
aaggcacatggtggaagcatcgaaactagtggattaggagatgtgtttgattcacatact
agccacctaacagttcctcattgcacattccttcagcgctgggaccggttgattgactta
gaagctagagagattgagcttgtaaagaaaaaaatctggcgttcgcatagtttgaagagt
gataattccactagtttcctttcttctcttgttcttgatgcttcagatgaacttccacat
cagaagtctcataaagaaaaccggttcatttatcgttttgtgtatcgagatctaacatct
ttcaatatgaaagcttctgatggacattcttcaactgttgacacttctccaacaagtgat
atggactgcacacttaaaagtggagactatgtgatacttagcaccgaatctggccatcta
accattgcaagtggggtcattacagagatcagtcgctttcacgtttttgtttctttttct
aagcgcctacgacttcctgggagcaatccttcttcagaagcccagaatctttttagagag
gtttggcggattgacaaggatgaatttatgacttcgtttgcagtaatgaggtttaacctt
gtacaactttttctacaaagtgtgcaaagtactcatcttcggaagataattgttgacctt
gaggctcctaaatttgacagtggatgtatattcagccaagatccagcaatagcttatgta
tggtcagagaagaatttgaatgatgatcagcgtcgagctatccttaagatacttacagca
aaggattacgctctaatactaggaatgcctggaacgggcaagacttctacaatggtgcat
gctgtgaaggccttgttgatgagaggtgcatccatcttgcttacatcctatacaaactcc
gctgttgataatttgcttataaaattaaaagctcagggcattgattttgtacgtattgga
agacatgaagctgtacatgaggaagttcggggacattgcttttctgcgatgaacatacaa
agcgtcaaagatgttaaactaagattagaccaagtcaaagttgttgcagttacttgtctt
ggaattaccagtcccttgctcgccaacaagagatttgatgtctgcatcatggatgaagct
ggacagactaccctcccagtatctctgggacccttgatgtttgcttcaacatttgtactt
gttggtgaccattatcaactgcctcctcttgtccagagtacagaggctcgggagagtgga
atggggataagcttgttttgcaggctgtcagaagcacatcctcaggcaatttcagcactg
cagagccagtaccgtatgtgtcaaggcattatggaactatcaaatgccttgatatatggt
gacagattacgttgtggttcccccgaagtagccaatgccaaacttcagttttctagttta
aagtcttgttcattgtggctaaaggaggttttgaatccagccaaaccagtcatatttatt
gatacagatatgttgcctgcttttgaggcaaaagataaaaagactctgaataatccaatt
gaagcttacataattgcagaggtcaccgagcaattggttaacaatggaattggaggggaa
gatattggcatcattaccccttataattcccaggcaaatctcatccgccatgctgtatac
ataacctctgtggagatacataccattgataaataccagggaagagacaaggactgcatt
cttgtgtcatttgttaggtctagtgaaaatccaagggactgctcttcctcccttcttggt
gactggcataggattaatgtggctctcacgcgtgcaaagaaaaagatgatcatggtaggg
tcatgcaaaaccctatccaaggttccattactgaagctcctcatcaagaaagttgatgag
caatcaggcattctgagtgtatgcaagaaggatatcagttacaggggagagctgaagaga
tgctcccagttcagataa
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