Corylus avellana (European hazelnut): 132182159
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Entry
132182159 CDS
T09426
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132182159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132182159
03009 Ribosome biogenesis [BR:
cave03009
]
132182159
04131 Membrane trafficking [BR:
cave04131
]
132182159
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cave04147
]
132182159
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132182159
Ribosome biogenesis [BR:
cave03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
132182159
Membrane trafficking [BR:
cave04131
]
SNARE
SNARE associated proteins
Others
132182159
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132182159
Exosome [BR:
cave04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132182159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
CDC48_2
TIP49
AAA_22
AAA_33
Parvo_NS1
AAA_14
nSTAND3
RNA_helicase
NPHP3_N
AAA_28
Mg_chelatase
IstB_IS21
AAA_18
AAA_7
ABC_tran
AAA_17
AAA_24
ATPase_2
AAA_lid_PRS2_C
NACHT
NB-ARC
TsaE
DUF815
Sigma54_activat
Vps4_C
AAA_19
Viral_helicase1
Zeta_toxin
SLFN-g3_helicase
DUF5906
Motif
Other DBs
NCBI-GeneID:
132182159
NCBI-ProteinID:
XP_059451333
LinkDB
All DBs
Position
ca5:32172753..32175269
Genome browser
AA seq
829 aa
AA seq
DB search
MLFLVLALLLSVSVCQCVFVWNPITMKTEAAESMSSRKRKRDEKTGAAMFKPKKVPNRLA
VGDMQDGDNSVVVLHPETLQSLNLFNTDTVLIRGKLRRDTVCVVVADPACDKSKIGMNKV
VRLNLRVRIADMVSVHECPNVYDGKKVHVLPLDDTVDGLTGNLFDAYLRPYFDGSFRPVR
KGDLFVVRGGMRSVEFKVIETDPEPFCLVAPDTEIYCEGEPVKREEEERLCDVGYEDLGG
VRKQVAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGTGKTMIARAIANETGAFFLC
INGPEIMSMLAGESESNLRKAFAAAERNAPSIVFIDEIDSIAPKRDKTEGEVERRIVSQL
LTLMDGLNSRANVVVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEILRVHTKNM
KLSEDVDLEKVAKETHGHVGADLAALCTEAALQCIREKLDVMDMDDETIDADVLSSMAVT
NDHFKVAVGNSIASALRETVVEVPHVSWEDIGGLEGVKRELQETVQYPVEHPEKFEKFGM
SPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQ
SAPCVLFFDELDSIAIQRGSSVGDAGGAVDRVLNQILTEIDGLSSKKTIFVIGATNRPDI
IDPALLRPGRLDQLIYIPLPDESSRLQIFKACLRKSPLSQDVDLAALAKFTQGFSGADIT
EICQRACKYAIREDIEKDLERRRRSPEAMEEDDADNGVSEIKAAHFVESLKYARKSVSQA
DIQKYQAFARTLQHSRGFGSDLFKCSIDKTETEEGSHLFARDEDDTLYN
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgctctttcttgttcttgctcttcttctttctgtttctgtgtgtcaatgcgtgtttgtt
tggaatccgatcaccatgaaaactgaggcagcggagtccatgagttctcgcaaaaggaaa
agagacgagaaaaccggcgccgccatgttcaagcccaagaaagttccgaacaggctggcg
gtgggcgacatgcaggacggcgataactctgtcgtcgtactccacccagaaaccttgcaa
agcctcaacctcttcaacaccgacacggtcttgatcagaggcaaacttcggagggacacc
gtctgcgttgtcgtggcggacccggcatgcgacaagtccaagatcggcatgaacaaggtg
gtcaggttgaacctcagagtcaggatcgccgacatggtctccgtccacgaatgccccaac
gtttacgacggcaagaaagtgcacgttcttcctctggacgacaccgtcgacgggctcacc
ggaaacctcttcgacgcctacttgaggccttactttgatggctcgttccggccggtgagg
aaaggcgatttgtttgtcgtcagaggcggaatgaggagcgtggagttcaaggtcatagag
accgaccctgaacctttctgcttggttgcgcctgacacggaaatctactgcgaaggagag
cctgtgaagagagaggaggaagagagattatgcgacgttggatatgaagacctcggcggc
gtcaggaaacaagttgcgcaaattagagagctggtggagttgcctctaaggcatccgcag
cttttcaagagtattggcgtgaaacccccaaaaggaattctgctttatgggcctccgggg
accgggaagacgatgattgcaagggctattgctaatgaaactggtgctttctttctctgt
atcaatgggccggagatcatgtcgatgttggccggagagagtgaaagcaatctgcggaaa
gcgtttgctgcggcggagaggaatgctccttccattgtgtttattgatgagattgactcc
attgctcccaagcgtgataagactgaaggtgaggtggagaggaggattgtttcccagctc
ttgactctcatggatgggctgaactcgcgcgccaatgtcgtcgttattggcgctacgaat
cggccgaacagcatcgaccccgcgctgagaaggtttgggaggtttgacagagagattgac
attggtgttccggatgaggtcggtcgtcttgagattcttcgggttcatacaaagaacatg
aagctgtcggaagatgtggatttggagaaagtagcaaaggagactcatgggcatgtcggt
gctgatcttgcggctctttgcactgaggctgcactgcaatgtattagagagaagttggat
gtaatggatatggatgatgagacgattgatgccgacgttctcagctccatggctgtcaca
aacgaccacttcaaagtggcggttggaaacagcattgcctctgctttgcgtgaaacagtt
gtggaagttccccatgtgagctgggaagacattggcggccttgagggtgtcaagagggag
ctgcaagagacggttcagtacccggtggagcatccggagaagtttgagaagttcggcatg
tctccgtcgagaggagttctcttctacggccctcccggttgcggaaaaactctgcttgcc
aaagctattgccaacgagtgccaagccaatttcattagtatcaagggtcctgagctactc
accatgtggtttggagagagtgaggctaatgttagggatgtttttgacaaggcccgccag
tcagcaccatgtgttctgttctttgatgaactcgactccattgccattcagagaggaagc
agcgtgggagatgctggtggtgctgttgatagggttctcaaccaaatattgactgagatt
gatggattgtcatccaagaaaactatctttgttattggggctacaaaccggcctgatata
attgacccggcacttctccgcccagggcgtcttgatcagttgatttatatccctctccca
gacgagagttcgcggcttcagatttttaaagcctgtctgagaaaatcacctttatcccaa
gatgttgatcttgcagctcttgccaagtttacacaaggcttcagcggggctgatatcacg
gaaatatgccagagggcttgcaagtacgctataagggaggatattgagaaggatttggag
aggagaaggaggagccctgaagctatggaagaggatgatgctgataatggagtatcggag
atcaaggcagctcactttgtggagtccctcaagtacgccaggaagagtgtaagtcaggcc
gacatccaaaagtaccaagcatttgcaagaaccttgcagcattccaggggtttcgggtct
gatttgttcaagtgttccattgacaaaacagaaacagaagaaggttcacatctgtttgca
agggacgaggatgatacgctttataattag
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