Corylus avellana (European hazelnut): 132182209
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Entry
132182209 CDS
T09426
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave00040
Pentose and glucuronate interconversions
cave01100
Metabolic pathways
Module
cave_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132182209
Enzymes [BR:
cave01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
132182209
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
DUF1565
Motif
Other DBs
NCBI-GeneID:
132182209
NCBI-ProteinID:
XP_059451382
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Position
ca5:complement(34271647..34275414)
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AA seq
458 aa
AA seq
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MKMCRFNVKEPTLIFVIALFVWSSSFENCSAWGDEDKSLGNTAPGSWPTKEKYAPYVPPE
TTAATPKQGGWNSAIFNVLEYGAKGDGHSDDTKAFEAAWAAACNVEGSTLFVPSGFVFLV
KPISFSGPNCQPNIQFQLDGKIIAPTSSEPWGSGLLQWLEFKNLKGITVFGKGVIDGQGS
VWWDGTGKMPSTRPTALRFYGSKSVTVTGITILNSPRTHLKFDNCVSVQVFDIYISSPGD
SPNTDGIHLQNSEDVVIYRSNLACGDDCVSIQTGCSNVYIHNVNCGPGHGISIGALGMDN
TKACVSNITVRDIALHNTLTGVRIKTWQGGLGSVQGIMFSNIQVSQVKIPIMIDQFYCAS
DKNKCQNKTSAVAVSGINYENIRGTYTVKPVHFACSDGLPCTSLSLANMELMPLQLNNDL
CESFCWNAYGTLRTRNVPPIACLLTSTRFQSNHNSCWA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgtgtaggtttaacgttaaagagcctacgttaatttttgtgattgccttgttt
gtttggtcttcaagctttgagaattgcagtgcttggggagatgaggacaagagcctaggc
aacactgcaccaggctcttggccgacgaaggaaaaatatgctccttacgtgccacctgaa
actacagcggcaacaccaaaacaaggtggatggaactccgccatttttaatgtattagag
tatggtgctaaaggcgatggacattccgacgatacaaaggcgttcgaagcagcgtgggca
gcagcttgcaatgtggagggatcaacattgtttgttccatctgggtttgtgttcctcgtc
aaaccaatctccttctccggccctaattgtcaaccaaacattcaatttcagttggatggc
aaaattatagctcctacaagcagtgaaccttgggggtcaggcctcttacagtggctcgaa
ttcaaaaaccttaaaggaattacagttttcggtaaaggtgtcatcgatggacaaggctca
gtctggtgggatggaacgggaaaaatgccaagcaccagaccaacggcactcaggttttat
ggaagcaagtctgtgacggtcactgggataacaattctaaacagtccacgaacgcacctc
aaatttgacaattgtgttagtgttcaggtctttgacatatatatttcatcccctggtgac
agccccaacacggatggaatacacctccaaaactccgaagatgttgtcatctacagaagc
aatcttgcatgtggagatgattgtgtatccatacaaactggatgctcaaacgtatacata
cacaatgtcaattgcggacctggacatggaatcagcatcggagccctaggaatggataac
accaaagcttgtgtttcaaacatcaccgtccgagacattgcgctgcataatactctgact
ggtgtcagaataaaaacatggcagggtggcttgggttcagtccaaggaatcatgttctca
aacatccaagtttctcaagttaaaatcccaatcatgatcgaccaattctactgtgctagt
gacaagaacaaatgccagaacaaaacatcagccgtggcagtgtcaggcataaactatgaa
aatatacgaggaacatacacagtcaaacctgtacattttgcatgtagcgacggcttgccc
tgcaccagtttatcactagctaacatggagttaatgccacttcaacttaacaacgacttg
tgtgaatctttctgttggaatgcatatggaacactgagaactagaaatgtccctccaatt
gcctgtttgctgacaagcactagatttcagtctaatcataattcttgctgggcttag
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