KEGG   Corylus avellana (European hazelnut): 132182356
Entry
132182356         CDS       T09426                                 
Name
(RefSeq) FACT complex subunit SSRP1
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
cave  Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:cave00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cave03000]
    132182356
   03036 Chromosome and associated proteins [BR:cave03036]
    132182356
Transcription factors [BR:cave03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    132182356
Chromosome and associated proteins [BR:cave03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     132182356
SSDB
Motif
Pfam: PH1_SSRP1-like POB3_N SSrecog Rttp106-like_middle HMG_box HMG_box_2 HMG_WDHD1 CDC45 HMG_box_5 CHDNT
Other DBs
NCBI-GeneID: 132182356
NCBI-ProteinID: XP_059451568
LinkDB
Position
ca5:33151054..33157621
AA seq 643 aa
MTDGHLFNNISLGGRGGTNAGQLKIYSGGILWKKQGGGKAIEVDKTDIMGVTWMKVPRTN
QLGVRIKDGLFYKFTGFRDQDVTSVTNFFQTSCGITPEEKQLSVSGRNWGEVDLNGNMLA
FLVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVDSTLSMN
DDLLNTKYKDKLDPSYKGLIHEVFTTIMRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIEYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLGDVQTTDGVARVLQDEEDDAVDPHLERIKNQAGGDESDE
EDEDFVIDKDDGGSPTDDSGEGESDASESGGEKERPPKKESKKETSSSKASSSKKKSKDG
DEDGSKKKKQKRKKDPNAPKRALSGFMFFSQMERENIKKSNPGIAFTDVGRVLGDKWKKM
SVEEKEPYEAKARQDKKRYKDEISGYKNPQPMNIDSGNESDSA
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgaccgacggccacctcttcaacaatatctctctaggaggccgcggaggcaccaatgca
gggcaacttaagatatattcaggagggattttatggaagaaacaaggaggtggtaaggca
attgaggtggataaaactgacatcatgggggtaacatggatgaaggtcccaaggacaaat
caacttggtgttcggatcaaagacgggttattctataagtttactgggttccgggaccag
gatgtcactagtgtgaccaatttcttccaaaccagttgcggcataacaccagaggagaag
caactttctgtcagtgggcgtaattggggagaagttgatttaaatgggaatatgctggct
tttttggttggttcaaagcaagcatttgaggtatctctagcagatgtctcacaaactcag
cttcaagggaaaaatgatgtaatcttagagttccatgtagatgatacaactggagctaat
gagaaagattcattgatggagattagttttcacatacctaattccaacacccaatttgtt
ggtgatgagaatcgtcctcctgctcaggttttccgtgacaaaatcatgtcaatggcagat
gttggtgctggaggtgaagaagctgtggttacctttgagggcattgcaatcctcacgcca
aggggccgatacaatgttgaacttcatctttcattcttacggctccaagggcaggctaat
gatttcaaaattcaatacagtagtgttgttcgcctgtttttacttcctaagtctaaccag
ccacatacatttgtagttgtgactcttgatccaccaatccgtaaagggcaaactttgtac
ccacatattgtgctgcagtttgaaactgactatgtagttgatagcaccctgtcgatgaac
gatgatcttttgaacaccaaatacaaggacaagttagacccatcatataaggggctcatt
catgaagttttcacaacgataatgcgtggcttgtctggtgccaaagttactaaaccagga
aaattccgaagctgtcaagatggttatgcagtgaagtcatcattgaaggctgaagatggg
gtcctgtatccacttgaaaagagtttcttctttctaccaaaacctcctacacttattctt
catgaagagattgagtatgtggaatttgagaggcatgctgctggtggctcaaatatgcat
tacttcgaccttcttataagactcaaaactgagcaagaacatctatttcggaacatccag
aggaacgaataccataatctttttgacttcatcagtgggaagggattgaaaattatgaac
ctgggagatgtccaaactacagatggtgttgcacgtgttcttcaagatgaagaagatgat
gctgttgacccacatcttgagcgcatcaagaatcaagctggtggagatgagagtgatgaa
gaggatgaagattttgttattgacaaagatgatggaggttctccgactgatgattctgga
gagggggaatctgatgctagtgaaagtggaggggagaaagagaggcctcccaaaaaagaa
tccaaaaaagagacttcatcttccaaggcttcttcttctaagaagaaatctaaagatgga
gatgaagatggttcaaagaagaagaaacagaaaaggaaaaaggatccgaatgcaccaaag
agggcactgtctggtttcatgttcttctcacaaatggaaagagagaatataaagaaaagc
aaccctggaatcgcatttacggatgtggggagagtacttggagataagtggaaaaagatg
tcagtggaggagaaagaaccatatgaagcaaaggctcgtcaagacaaaaaacggtacaag
gatgaaatcagcggctacaagaacccacagccaatgaatatagattcagggaatgaatct
gatagcgcatag

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