Corylus avellana (European hazelnut): 132182356
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Entry
132182356 CDS
T09426
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cave03000
]
132182356
03036 Chromosome and associated proteins [BR:
cave03036
]
132182356
Transcription factors [BR:
cave03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
132182356
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
132182356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
HMG_box_5
CHDNT
Motif
Other DBs
NCBI-GeneID:
132182356
NCBI-ProteinID:
XP_059451568
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All DBs
Position
ca5:33151054..33157621
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AA seq
643 aa
AA seq
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MTDGHLFNNISLGGRGGTNAGQLKIYSGGILWKKQGGGKAIEVDKTDIMGVTWMKVPRTN
QLGVRIKDGLFYKFTGFRDQDVTSVTNFFQTSCGITPEEKQLSVSGRNWGEVDLNGNMLA
FLVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVDSTLSMN
DDLLNTKYKDKLDPSYKGLIHEVFTTIMRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIEYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLGDVQTTDGVARVLQDEEDDAVDPHLERIKNQAGGDESDE
EDEDFVIDKDDGGSPTDDSGEGESDASESGGEKERPPKKESKKETSSSKASSSKKKSKDG
DEDGSKKKKQKRKKDPNAPKRALSGFMFFSQMERENIKKSNPGIAFTDVGRVLGDKWKKM
SVEEKEPYEAKARQDKKRYKDEISGYKNPQPMNIDSGNESDSA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggccacctcttcaacaatatctctctaggaggccgcggaggcaccaatgca
gggcaacttaagatatattcaggagggattttatggaagaaacaaggaggtggtaaggca
attgaggtggataaaactgacatcatgggggtaacatggatgaaggtcccaaggacaaat
caacttggtgttcggatcaaagacgggttattctataagtttactgggttccgggaccag
gatgtcactagtgtgaccaatttcttccaaaccagttgcggcataacaccagaggagaag
caactttctgtcagtgggcgtaattggggagaagttgatttaaatgggaatatgctggct
tttttggttggttcaaagcaagcatttgaggtatctctagcagatgtctcacaaactcag
cttcaagggaaaaatgatgtaatcttagagttccatgtagatgatacaactggagctaat
gagaaagattcattgatggagattagttttcacatacctaattccaacacccaatttgtt
ggtgatgagaatcgtcctcctgctcaggttttccgtgacaaaatcatgtcaatggcagat
gttggtgctggaggtgaagaagctgtggttacctttgagggcattgcaatcctcacgcca
aggggccgatacaatgttgaacttcatctttcattcttacggctccaagggcaggctaat
gatttcaaaattcaatacagtagtgttgttcgcctgtttttacttcctaagtctaaccag
ccacatacatttgtagttgtgactcttgatccaccaatccgtaaagggcaaactttgtac
ccacatattgtgctgcagtttgaaactgactatgtagttgatagcaccctgtcgatgaac
gatgatcttttgaacaccaaatacaaggacaagttagacccatcatataaggggctcatt
catgaagttttcacaacgataatgcgtggcttgtctggtgccaaagttactaaaccagga
aaattccgaagctgtcaagatggttatgcagtgaagtcatcattgaaggctgaagatggg
gtcctgtatccacttgaaaagagtttcttctttctaccaaaacctcctacacttattctt
catgaagagattgagtatgtggaatttgagaggcatgctgctggtggctcaaatatgcat
tacttcgaccttcttataagactcaaaactgagcaagaacatctatttcggaacatccag
aggaacgaataccataatctttttgacttcatcagtgggaagggattgaaaattatgaac
ctgggagatgtccaaactacagatggtgttgcacgtgttcttcaagatgaagaagatgat
gctgttgacccacatcttgagcgcatcaagaatcaagctggtggagatgagagtgatgaa
gaggatgaagattttgttattgacaaagatgatggaggttctccgactgatgattctgga
gagggggaatctgatgctagtgaaagtggaggggagaaagagaggcctcccaaaaaagaa
tccaaaaaagagacttcatcttccaaggcttcttcttctaagaagaaatctaaagatgga
gatgaagatggttcaaagaagaagaaacagaaaaggaaaaaggatccgaatgcaccaaag
agggcactgtctggtttcatgttcttctcacaaatggaaagagagaatataaagaaaagc
aaccctggaatcgcatttacggatgtggggagagtacttggagataagtggaaaaagatg
tcagtggaggagaaagaaccatatgaagcaaaggctcgtcaagacaaaaaacggtacaag
gatgaaatcagcggctacaagaacccacagccaatgaatatagattcagggaatgaatct
gatagcgcatag
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