Corylus avellana (European hazelnut): 132182370
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Entry
132182370 CDS
T09426
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04120
Ubiquitin mediated proteolysis
cave04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132182370
04120 Ubiquitin mediated proteolysis
132182370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cave04121
]
132182370
Enzymes [BR:
cave01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132182370
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
U-box type E3
132182370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
132182370
NCBI-ProteinID:
XP_059451583
LinkDB
All DBs
Position
ca5:32239504..32248019
Genome browser
AA seq
1044 aa
AA seq
DB search
MATPKPQKRSPEEIEDIILRKIFLVSLTDSAESSAPSDPRVVYLEMTAAEILSEGKEMRL
SRDLMERVLIDRLSGGFVSSEPPFQYLTGCYRRAYEEGKKISSMKDKNVRSEMEFVVRQA
KKLAVSYCRIHLGNPELFQNANANSKSGSSNSPLLPLVFAEVGGSMDGYGAGGSSGGTQC
PPGFLEEFFRDSDFDSLDPILKGLYEDLRGSVLKVSALGNFQQPLRALLYLVSFPVGAKS
LVNHPWWIPKGAYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASIRRPA
DLLSSFTTIKTVMNNLYDGLSEVILSLLKNTDIRENVLEYLAEVINKNSSRAHIQVDPLS
CASSGMFVSLSAVMLRLCEPFLDASLTKRDKIDPKYVFHSNRLDLTGLTALHASSEEVAE
WLNNTNLGKTDGSRQYTDGENRLLQSQEATSSGSGASGSSNAKPASSGDKTKYPFICECF
FMTARVLHLGLLKAFSDFKHLVQDIQRCEDSLSTLKDMQGHAPTPALEPDISRLEKEIEL
YSQEKLCYEAQILRDGALIQNALSFYRLVVVWLVGLVGGFKMPLPSACPMEFACMPEHFL
EDAMELLIFASRIPKALDGVLLDDFMNFIIMFMASPNFIRNPYLRAKMVEVLNCWMPRRS
GSSITATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVP
SHRNAWRQIAKEEEKGVYLTFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWEQRP
AQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITVPFLLPEMVERVASMLNYFL
LQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVYIYVHLAKGDTENIFPAAISKDGRSYNEQ
LFSAAADVLRRIGEDGRVIQEFIELGAKAKVAASEAMDTEATLGEIPDEFLDPIQYTLMK
DPVILPSSRITVDRPVIQRHLLSDNTDPFNRSHLTADMLIPNDELKGRIEEFIRSQEMKQ
HGERLSKESIKATIQTTNSEMLID
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccaaaaccccaaaagaggtccccggaggaaatcgaggacataatcctcagg
aaaatcttcctggtatcgctgaccgattcggccgaatcatcagcaccgtccgatccccga
gtcgtctacctggagatgaccgcggcggagattctgagcgagggcaaagagatgaggctc
tcgagagacttgatggagagggtcctgatcgatcggctctcggggggtttcgtctcctcc
gaaccgccattccagtaccttaccgggtgctatcggcgagcctacgaggagggcaagaag
atatcttccatgaaggacaagaacgtgaggtccgagatggagtttgtggtgaggcaagcg
aagaaattggcggtgtcgtactgtaggattcacttagggaaccccgaattgtttcagaat
gcgaatgcgaattcgaagtcaggttcgagcaattccccgttgttgccgctggttttcgcg
gaggttgggggctcgatggacgggtacggagctggtggtagcagtggcgggacacagtgc
ccacctggcttcttggaggagttctttagggactcggatttcgatagcttggaccccata
ttgaagggattgtatgaggacttgaggggcagtgtgctcaaggtctcggcgctcgggaac
tttcagcagcctttgagggctttgctgtatttggttagcttcccggttggtgccaaatcg
ttggtgaatcacccgtggtggattcccaaaggcgcctatttgaacggccgggttatcgag
atgaccagcatactggggccattttttcatgttagtgctctgcctgatcatgccattttc
aagagccagcctgatgtgggacagcagtgcttttcagaagcatcaattcgtcgaccggct
gatttattatcctcatttaccacaattaaaacggttatgaataacttatatgatggtcta
tcagaagttattctctcactccttaaaaatacggacatccgtgaaaatgtgctcgagtat
cttgcagaggtgatcaataaaaactcgtcgagggctcacatccaggttgatcctctatcg
tgtgcaagttcaggcatgttcgtcagtctcagtgctgttatgcttcggctgtgtgagccg
tttttagacgctagcttaacaaaaagggataaaattgatcccaaatatgtatttcacagt
aaccgactggatttaacagggttgactgctcttcatgcatcatcagaagaagttgcggaa
tggcttaataataccaatttggggaagactgatggctctagacaatatactgatggtgaa
aatcggttgcttcaatctcaagaagctaccagttctggcagtggtgctagtggctcctct
aatgcaaagccagcatcaagcggtgataaaactaaatatccatttatttgcgaatgcttc
tttatgactgcaagggtgctccacttgggtttattaaaagcattttctgactttaaacat
ttagttcaggacattcaaaggtgtgaagattctctctctactcttaaagacatgcaaggg
catgctcctactccagcattggagccggacatttctcgccttgagaaagaaatagagttg
tattcacaggaaaaactttgttatgaagctcagatattgagggatggagcacttattcag
aatgctctttctttctaccggttggtggtggtttggttggttggcctggttggtggattt
aagatgcctctgccatccgcttgcccaatggagtttgcatgtatgccagagcattttctg
gaagatgccatggaattgcttatttttgcttcccggattccgaaagctttggatggggtt
ttgctggatgacttcatgaactttattatcatgttcatggcaagtccaaattttattaga
aacccttatctcagagcaaagatggttgaagtgctaaactgctggatgccacgtagaagt
ggctcatctattacagctactctatttgaagggcaccaactctctcttgagtatcttgtg
aggaatcttctgaagctctatgttgacattgagttcactggttctcacacgcagttctat
gacaagtttaacatccgtcacaatattgccgaacttctcgaatacctgtggcaggtccct
agtcatcgtaatgcttggagacagattgccaaggaggaggaaaagggtgtctatttgact
ttcttaaacttcctgattaatgatagcatctatcttctcgatgaaagtcttaacaaaatt
cttgaactgaaagagttggaagccgagatgtcaaataccgcagaatgggagcaaagacca
gcccaagagaggcaggagagaacccgactattccactcccaagagaatattatccggatt
gatatgaagttggcaaatgaggatgtgagtatgctggcatttacttcggagcagattaca
gttcctttcctacttcctgagatggttgagagagtggccagcatgctcaattattttttg
ttgcaacttgtgggtccccaaagaaaatctcttactctgaaagatcctgaaaaatatgaa
ttccgtccaaaacagttgcttaagcagattgtctacatatatgttcatcttgcaaagggt
gatacggaaaacattttcccggctgctatatcaaaagatggtcgatcatacaatgaacag
ttatttagtgctgcagcagatgttctgcgaagaattggtgaagatggaagggtaatacag
gaatttattgagctaggtgccaaggccaaagttgcagcttctgaggcaatggacactgaa
gctactcttggagagatacctgatgaattccttgacccaattcaatacactttgatgaag
gatccagttatcttaccttcttcaaggatcacggtagaccgacctgtcattcaaaggcat
cttcttagtgataatactgaccctttcaaccgttcccatcttactgcggacatgctgatt
ccaaacgatgagttgaagggaagaattgaagagttcatcaggtcccaggaaatgaagcag
catggggaacgccttagcaaggagagcatcaaggcgacaatacaaaccacgaatagtgaa
atgttaatcgattag
DBGET
integrated database retrieval system
