Corylus avellana (European hazelnut): 132182624
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Entry
132182624 CDS
T09426
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132182624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132182624
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132182624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
132182624
NCBI-ProteinID:
XP_059451910
LinkDB
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Position
ca5:1803090..1810865
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AA seq
478 aa
AA seq
DB search
MQSDSGKLFIGGISWDTNEERLKEYFSSYGEVVEAVIMKDRTTGRARGFGFVVFADPAVA
DRVVKEKHNIDGRMVEAKKAVPRDDQNILNRNSGSIHGSPGPGRTRKIFVGGLASTVTES
DFKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLVKSFHELNGKMVEVKR
AVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYSPSTVGGYGLRMDDRLSPISGGRS
GYPPFGSGYGVGMNFEPGLNPGYGGSANFNSNLSYGRGLNPYYVGNSNRFGSPIGYDGRS
GGSSFFSSVTRNLWGSGGLNYGTNSTSSSAYQGSGSGSIVGSTFGNTGVNWGSSGISAQG
GNNVSNSSGNLGYGGGDNSYSLGMGGYGRNSGTNTAPTSSFAASNGGFDGGFDFHSGGSV
YGGDSTWRSSNAEQDGSGPFGYDGLGSAASDVSAKAPPGYVGGYSVYKRQQSNRGISA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgatagtggtaagttatttattggtggaatatcttgggacacaaatgaagag
cgtctcaaggaatattttagttcatatggggaggttgtagaagccgttattatgaaggat
cggaccacaggacgtgctcgaggttttggctttgttgtttttgctgacccggctgttgca
gacagagtcgtaaaggagaagcacaacattgatggaaggatggttgaggcaaaaaaggca
gtccctcgggatgatcaaaatattttgaatagaaacagtggtagcatccatggctctcct
ggtcctggccgcacaagaaagatatttgttggaggcttggcatccacggtcacagagagt
gacttcaaaatgtattttgatcagtttgggacaatcactgatgttgtggtgatgtatgat
cacaacacccagaggcctagaggctttggattcattacttatgattcagaggaagcagta
gacaaggttttggttaagagcttccatgagctaaatggtaaaatggttgaggtcaagcgt
gctgttcccaaagagttatccccaggtcccagtcgcagccctcttggtggatacaactat
ggcctgagtagggtcaatagcttccttaatggctacactcaaggatatagtccaagcaca
gttgggggctatggactgaggatggatgatagattaagtccaatatctggtggtcgaagt
gggtatcctccatttggttctggttatggagtgggtatgaattttgagccggggttgaac
ccaggttatggggggagtgcaaattttaatagtaatctcagctatgggcggggattgaac
ccttattatgttggtaattcaaataggtttggtagtccaattgggtatgatggtcgtagt
ggaggctcttcctttttcagctcagttactcgaaatctgtggggaagtggggggcttaat
tatgggacaaactccacaagttccagtgcgtaccagggatctggaagtgggagcattgta
ggaagtacatttggtaatactggagttaattggggttcttcaggaatttctgctcaaggt
ggaaacaatgtttctaacagtagtggaaatcttggttatggaggtggtgataacagctat
agtctgggaatgggagggtatggaagaaacagtggtaccaatacagccccaacatcatct
tttgctgcatcaaatggtggttttgatggtggttttgactttcatagtggcggttcagta
tatgggggggacagcacttggcgatcatcaaatgctgagcaagatgggtctggtcccttt
ggttatgatgggcttggcagtgcagcttccgatgtttctgctaaagctcctcctggttat
gttggtggttatagtgtctataagagacaacagtcaaacagaggaatttctgcgtag
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