Corylus avellana (European hazelnut): 132182801
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Entry
132182801 CDS
T09426
Name
(RefSeq) WD repeat-containing protein RUP2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04120
Ubiquitin mediated proteolysis
cave04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132182801
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
132182801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cave04121
]
132182801
Enzymes [BR:
cave01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132182801
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132182801
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132182801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EIPR1
EIF3I
Beta-prop_DCAF4
WD40_like
Beta-prop_DCAF12
NBCH_WD40
MC5
Motif
Other DBs
NCBI-GeneID:
132182801
NCBI-ProteinID:
XP_059452129
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All DBs
Position
ca5:complement(23599963..23601408)
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AA seq
394 aa
AA seq
DB search
MKNFSTKFHPLSQEEQTQERKGEEKEKESIEEDNQLQLQVVEEEEDEDDDEEERARCEWD
FNLSTIVSSDTAGAGTDTLGVIEFDPSDSFVATGGIARKIRIYSLSSLLPHESTTSLDHA
DACDFYICTPAKLSSLKWKPGSDGRVLGSGDYDGVVMEYELERRMPVFERDEHGGRRVWS
VDYSRWDPVMGASGSDDGTMQMWDPRCEGGKCMATVQPSVRRSPVCCVEFNPVGGALVAV
GCADRRAYVYDIRKMVDPVVVFDGHGKTVTYVRFLDAHTMASAGTDGCLKTWSINDARVI
RTYKGHVNNRSFVGLSVWRNGGLLGCGSESNEVFVYDRRWSEPIWVHGFEPVARAGYDQG
FVSSVCWRQIEEDRCTLVAGGSDGVLQVFAGKRK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacttttccacaaaattccatcccctaagccaagaagagcaaacccaagaaaga
aaaggagaagaaaaagaaaaagaaagcatagaggaagataatcaattacaattacaagta
gtagaagaagaagaagatgaagatgatgatgaagaagaaagagccagatgtgagtgggat
tttaatctctccactattgtttcttccgacacagccggagcggggaccgacaccctcgga
gtaatcgagttcgacccgtccgacagctttgtagccaccggcggtattgcgagaaagatc
agaatttatagtttaagctctttgttgcctcatgaaagtactacttcgttagaccatgcc
gatgcatgtgacttctacatatgcactcctgcaaagcttagcagcctgaaatggaaaccc
ggttcggacgggcgggtcttggggtccggagactatgacggggtggtcatggagtacgaa
cttgagagaagaatgcccgttttcgagcgggacgagcatggagggcgccgagtctggagc
gtggactattcgcgctgggatccggttatgggggcgtccgggtcggacgacggaaccatg
caaatgtgggatccacgttgcgagggtgggaaatgcatggccacggtgcagcctagcgtg
cgacgcagtcccgtctgttgcgttgagttcaatccggttggtggagcgctggtcgccgtt
ggatgcgcggaccggagggcgtacgtgtatgacatccggaagatggtggacccggttgtt
gtttttgatgggcatggtaaaaccgtcacatacgtccgatttctggatgcccacacgatg
gcgtcagcagggactgatgggtgtttgaagacgtggagtatcaatgatgcccgtgtaatc
cgcacgtataagggacacgtcaacaaccggagctttgtcgggttgtcagtgtggaggaat
ggcgggttactcggatgcgggtcggaaagtaacgaggtttttgtgtatgataggaggtgg
agtgagccgatatgggtgcatggatttgagccggtggctagagccgggtatgaccaaggg
tttgtcagtagcgtgtgctggaggcaaattgaagaggacaggtgcactctggtggcaggg
ggatcagatggggttttgcaggtttttgcagggaaaaggaagtaa
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