Corylus avellana (European hazelnut): 132183046
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Entry
132183046 CDS
T09426
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
KO
K13111
WD40 repeat-containing protein SMU1
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132183046
Spliceosome [BR:
cave03041
]
Complex B
Other components
Complex B specific factors
132183046
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GFIT
Motif
Pfam:
WD40
LisH_TPL
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
Nup160
PROPPIN
zf_topless
7TMR-HDED
TFIIIC_delta
Motif
Other DBs
NCBI-GeneID:
132183046
NCBI-ProteinID:
XP_059452425
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Position
ca5:26501395..26519090
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AA seq
513 aa
AA seq
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MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSVETFVADINSGRWDAI
LPQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEH
LLVRTYFDPNEAYQDSTKEKRRAQIAQAVAAEVTVVPPSRLMALIGQALKWQQHQGLLPQ
GTQFDLFRGTAAMKQDVDDMYPTNLSHTIKFGTKSHAECARFSPDGQFLVSCSVDGFVEV
WDYISGKLKKDLQYQADETFMMHDDPVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLR
RLERAHSQGVTSLVFSRDGSQLLSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTAD
GSRVITASSDCTVKVWDVKTTDCLQTFKPPPPLRGGDASVNSVHLFPKSTDHIIVCNKTS
SIYIMTLQGQVVKSFSSGKREGGDFVAACLSPKGEWIYCIGEDRNMYCFSYQSGKLEHLM
KVHEKDVIGVTHHPHRNLVATYGEDCTMKLWKP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgctagaaatcgaagctcgagatgtcatcaagattgtgctccaattttgcaaa
gaaaattccttgcaccaaacgtttcagacgttacagaatgagtgccaggtttctttgaat
actgtggacagcgtggagacatttgttgctgatattaatagtgggaggtgggatgcgata
ttgcctcaagtggctcagcttaaacttcccaggaataaattggaggatttgtacgagcag
attgtattggagatgattgaacttcgagagttggatactgcacgtgctattttaaggcaa
actcaggtaatgggtgtcatgaagcaagagcaacccgaaagatatttgcgacttgagcat
ctcttagtccgaacttactttgatccaaatgaggcttaccaagattcaacaaaggaaaaa
cgccgcgctcaaattgcccaagctgttgctgccgaagtcactgtggtgccgccatcacga
ttgatggctctaattggccaggctctgaagtggcagcagcaccaagggttacttcctcaa
ggaacacagtttgacttatttcgaggaactgctgctatgaaacaagacgtagatgacatg
tatccaacaaatctttcacacacaataaagtttgggactaaaagtcacgcagaatgtgct
cgattctcaccagatggacagtttcttgtctcttgttctgttgatggatttgtcgaggtc
tgggattacatcagtgggaagctcaagaaggatctccaataccaggctgatgaaacattt
atgatgcatgatgatcccgtgctttgtgttgattttagcagagattctgagatgcttgca
tctggatcacaagatggaaagattaaagtttggcgtataagaactggtcaatgcttgcgc
cgtcttgaacgtgcacattctcagggtgtcacaagtcttgtcttctctcgagatggaagc
cagttactaagtacatcatttgacagtacagcaagaatccatggcttgaaatctgggaag
ttgttgaaagaattccgtggccattcttcttacgtgaatgatgctatctttacagctgat
ggaagtcgtgttattactgcatctagtgattgcacagtaaaggtctgggatgtgaagact
acggactgtctgcaaacatttaagccaccacctcctttacggggaggtgatgcttctgtg
aattctgttcatcttttccccaaaagtactgatcatattattgtttgtaataagacatca
tcgatctacattatgacacttcaaggacaggttgtgaagagcttctcatctggtaaaaga
gaaggtggagactttgttgcagcctgtttgtcaccaaaaggggaatggatttactgtatt
ggtgaagacaggaatatgtactgcttcagctatcaatctggtaaactagagcacctaatg
aaggtccatgaaaaagatgtaattggcgtcactcatcacccacacaggaatcttgtggca
acgtatggtgaagactgcactatgaaattatggaagccttga
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