KEGG   Corylus avellana (European hazelnut): 132183046
Entry
132183046         CDS       T09426                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
cave  Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:cave00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cave03041]
    132183046
Spliceosome [BR:cave03041]
 Complex B
  Other components
   Complex B specific factors
    132183046
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd LisH_TPL ANAPC4_WD40 NBCH_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd DUF7165 Beta-prop_VPS8 Beta-prop_LRRK2 Beta-prop_WDR19_1st Beta-prop_HPS5 VPS8_N PROPPIN Beta-prop_IFT122_2nd zf_topless Beta-prop_IP5PC_F TFIIIC_delta 7TMR-HDED
Other DBs
NCBI-GeneID: 132183046
NCBI-ProteinID: XP_059452425
LinkDB
Position
ca5:26501395..26519090
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSVETFVADINSGRWDAI
LPQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEH
LLVRTYFDPNEAYQDSTKEKRRAQIAQAVAAEVTVVPPSRLMALIGQALKWQQHQGLLPQ
GTQFDLFRGTAAMKQDVDDMYPTNLSHTIKFGTKSHAECARFSPDGQFLVSCSVDGFVEV
WDYISGKLKKDLQYQADETFMMHDDPVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLR
RLERAHSQGVTSLVFSRDGSQLLSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTAD
GSRVITASSDCTVKVWDVKTTDCLQTFKPPPPLRGGDASVNSVHLFPKSTDHIIVCNKTS
SIYIMTLQGQVVKSFSSGKREGGDFVAACLSPKGEWIYCIGEDRNMYCFSYQSGKLEHLM
KVHEKDVIGVTHHPHRNLVATYGEDCTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgacgctagaaatcgaagctcgagatgtcatcaagattgtgctccaattttgcaaa
gaaaattccttgcaccaaacgtttcagacgttacagaatgagtgccaggtttctttgaat
actgtggacagcgtggagacatttgttgctgatattaatagtgggaggtgggatgcgata
ttgcctcaagtggctcagcttaaacttcccaggaataaattggaggatttgtacgagcag
attgtattggagatgattgaacttcgagagttggatactgcacgtgctattttaaggcaa
actcaggtaatgggtgtcatgaagcaagagcaacccgaaagatatttgcgacttgagcat
ctcttagtccgaacttactttgatccaaatgaggcttaccaagattcaacaaaggaaaaa
cgccgcgctcaaattgcccaagctgttgctgccgaagtcactgtggtgccgccatcacga
ttgatggctctaattggccaggctctgaagtggcagcagcaccaagggttacttcctcaa
ggaacacagtttgacttatttcgaggaactgctgctatgaaacaagacgtagatgacatg
tatccaacaaatctttcacacacaataaagtttgggactaaaagtcacgcagaatgtgct
cgattctcaccagatggacagtttcttgtctcttgttctgttgatggatttgtcgaggtc
tgggattacatcagtgggaagctcaagaaggatctccaataccaggctgatgaaacattt
atgatgcatgatgatcccgtgctttgtgttgattttagcagagattctgagatgcttgca
tctggatcacaagatggaaagattaaagtttggcgtataagaactggtcaatgcttgcgc
cgtcttgaacgtgcacattctcagggtgtcacaagtcttgtcttctctcgagatggaagc
cagttactaagtacatcatttgacagtacagcaagaatccatggcttgaaatctgggaag
ttgttgaaagaattccgtggccattcttcttacgtgaatgatgctatctttacagctgat
ggaagtcgtgttattactgcatctagtgattgcacagtaaaggtctgggatgtgaagact
acggactgtctgcaaacatttaagccaccacctcctttacggggaggtgatgcttctgtg
aattctgttcatcttttccccaaaagtactgatcatattattgtttgtaataagacatca
tcgatctacattatgacacttcaaggacaggttgtgaagagcttctcatctggtaaaaga
gaaggtggagactttgttgcagcctgtttgtcaccaaaaggggaatggatttactgtatt
ggtgaagacaggaatatgtactgcttcagctatcaatctggtaaactagagcacctaatg
aaggtccatgaaaaagatgtaattggcgtcactcatcacccacacaggaatcttgtggca
acgtatggtgaagactgcactatgaaattatggaagccttga

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