Corylus avellana (European hazelnut): 132183394
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Entry
132183394 CDS
T09426
Name
(RefSeq) nibrin homolog
KO
K10867
nibrin
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132183394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cave03032
]
132183394
03400 DNA repair and recombination proteins [BR:
cave03400
]
132183394
DNA replication proteins [BR:
cave03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
132183394
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
132183394
BRCA1-C complex
132183394
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
PTCB-BRCT
Yop-YscD_cpl
Nbs1_C
Motif
Other DBs
NCBI-GeneID:
132183394
NCBI-ProteinID:
XP_059452805
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Position
ca5:complement(28069410..28095987)
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AA seq
540 aa
AA seq
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MVWGLFPVDPLSGEDKYYIFAKGTYKVGRKGCDVIITKDKGVSRIHAEIVVDAMTSLNPL
LKKPSNILSKVRVRDCSKYGTSIDKNLGRKEKVHELPNKETTLEDGDLISFGTGNATYMF
SFVPLIFFACSESFHENQPLQDKISSIGAHINDSLTQECTHVLVDQLRPVKEDIVDAIVS
KKPIVLDSWVKFVAEKSIRTEIPSCSSYAPTLTMEGVSVKVADPKSREKCLEGYTFLLEP
IQMKFRDRLQSLLEVGGAKIISIKAFCSSSQDSGYGDNSRMVYVVPEGSAEESDGFQKLS
SLLRVNEMDLVRAVLSGLLDPSILISPCINVSSSCSTDETVVADSDVEVETATSIHANAT
VCTDEAVKVLSKPETSMATVHTEEAIKFVNKAETSMDHAAIRSEDSGVMNYRDSSYGMTV
RRDKVDDSECENADVIYSQTLVVRDMDITSGVSTATNNRVPNFKLFRKANTQSGNSFDNL
IPFSKYPYNDSDVGSEEMVESVKAEKKRKQMEAVAEDLFNNEKGRRRGVAGSLRGLLTNV
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggggcctctttcccgtcgaccctctctcaggtgaagataagtactatatcttt
gcgaagggaacatacaaagtgggtcgcaaaggttgtgatgtaattattaccaaagacaaa
ggagtttcccggatccatgcagaaatagttgttgatgcaatgacgtctttaaatcccctg
cttaaaaaaccttccaatattttgtctaaagttagggttagagattgctccaaatatgga
acgtctattgacaagaatcttgggcgaaaggaaaaggttcatgaactcccaaataaggaa
acaacgttagaagatggcgacttgatttcttttggaactggtaatgcaacctacatgttt
tcttttgtcccgctcatattttttgcgtgctcggagtccttccacgagaatcaacccctg
caagacaaaatctcatcaattggagctcatattaatgacagtctaactcaagagtgcaca
catgtgcttgttgatcaactcaggccagtgaaagaagacattgttgatgccattgtatca
aagaaaccgattgttcttgatagttgggttaagtttgttgcagaaaaaagcattcgcact
gaaattcctagctgcagttcttatgctccaacgctaaccatggaaggagtatcagtcaaa
gttgcagaccctaagtctcgtgaaaagtgtttggaaggatacacttttttgttggagccg
atacaaatgaagttcagggatcggttgcagtccttattggaagtgggcggtgcaaaaatt
atttctattaaagcattttgttcaagtagccaagactcgggctatggagataatagtcgc
atggtttatgttgtccctgaaggatcagcagaggagtctgatggatttcaaaaactcagt
tcattgttgagagtaaatgagatggatttagtacgtgctgttttatctggattgttggat
ccatccatattaatatcaccatgcataaacgtttcatcttcatgctccacagacgaaaca
gtggtagcagattctgatgtagaggtggaaacagccacatcaattcatgcaaatgcgacg
gtatgcactgatgaggccgttaaagttttgagcaagcctgaaacatcaatggctactgtc
cacactgaagaagccattaaatttgtgaacaaagctgaaacatccatggatcatgctgcc
atcagatcagaggacagtggtgttatgaactacagagacagtagttatggcatgacagtg
agaagggacaaggttgatgattctgaatgcgaaaatgcagatgtaatttacagccaaact
ttagttgtgcgagatatggacataacttctggtgtcagtactgctaccaacaatagagtt
cctaattttaaactcttcagaaaggccaatactcaatctgggaatagcttcgacaattta
attccgttttcaaagtacccatataatgattctgacgttgggagtgaagaaatggttgaa
tctgttaaagcagagaaaaagcggaagcaaatggaagctgttgcagaagacttatttaac
aatgagaagggaaggcgacgtggtgtggctggttctcttcgtgggcttcttacaaatgtt
tag
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