Corylus avellana (European hazelnut): 132183674
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Entry
132183674 CDS
T09426
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132183674
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cave01002
]
132183674
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132183674
03036 Chromosome and associated proteins [BR:
cave03036
]
132183674
Peptidases and inhibitors [BR:
cave01002
]
Metallo peptidases
Family M1
132183674
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132183674
Coactivators
SAGA/TFTC/STAGA complex
132183674
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
132183674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
HEAT_2
Motif
Other DBs
NCBI-GeneID:
132183674
NCBI-ProteinID:
XP_059453029
LinkDB
All DBs
Position
ca6:17236805..17304687
Genome browser
AA seq
1341 aa
AA seq
DB search
MAKPRKPKNDDAKPESTGALVRHQKLCISIDIDRRQIYGHTELEIAVPEIGIVGLHAENL
GIGSVLVDGEAADFEYYPRQQHVESEKRWSAVSTLSSAADAAGAAYVSALERELVPNLLI
NCCKGFKSGSDQQAVAENGFHSSGETKQQNVRLVRIEYWVEKAETGIHFKNNVLLTDNQI
RRARCWFPCMDDSSQRCCYDLEFTVAQNLVAVSNGTLLYQVLSKDNPPRKTYVYKLNVPV
AAQWISVAVAPFEILLDRHSTCITHMCLSANMSKLQNTVEFFHSAFSCYKDYLSMDFPFE
SYKQVFVEPEMAVSSLSLGASMSIFSSQALFDEKVIDQTIDTRIKLAYALARQWFGVYIT
PEAPNDGWLLDGLAGFLTDYFIKKNLGNNEARYRRYKANCAVCKADDSGATALSLSASCK
DLYGTQCIGLYGKIRSWKSVAIIQMLEKQMGPESFRNILQTIVSRAQDATRTSRSLSTKE
FRHLANKVGNLERPFLKEFFPRWVGSCGCPDLRMGFSYNKRKNMVELAVLRGCTASPDSS
ASVLNVNADSENRDGDIGWPGMMSIRVYELDGMYDHPILPMAGDTWQLLEIQCHSKLAAR
RFQKPKKGSKPDGSDDNGDVIPALDMRSSSESPLLWMRADPEMEYLAEIHFNQPIQMWIN
QLEKDRDVIAQAQAIATLEALPQLSFSVVNALNTFLTDSKAFWRLRIEAAFALANSASEE
TDWAGLTHLVKFYKSRRFDANIGLPKPNDFHDFPEYFVLEAIPHAVAMVRAADKKSPREA
VEFVLQLLKYNDNNGNPYSDVFWLAALVQAVGELEFGQQSILFLTSLLKRIDRLLQFDRL
MPSHNGILTVSCIRTLTQIALKLSEFIPLDRVVELIRPFRDFKTIWQVRIEASRALLDLE
FHCKGIDAVLSLFIKYIEEEPSLRGQMKLGVHAMRLCQISGGSNSNDNIKSHVLVSLLCL
LDGHIAFNNVFLRHHLFCIIQILAGRPPTLYGVPRETRTLLMGDPETCIEQKNIFSNLVP
EVKPPELPSDIPNPPETTSHTPHPSEPPPDIPNTSHDVLAIPQASKEADTVSSGHERKMP
SIKIRVKQSAATSRTEEADNQTVEKSHGERHERASSSVSVDAPQRNFAEAVSISNQNLEE
VNSCHDRGSRMTASIGSAKPASDGDEIGKELQCTADSSKVSVQPEADIPLPSSFIHDNSV
DAEAHKYASLQSLCRPGLDGGSLGITDSSLHGKEKKEKKKDKEKKRKREENKGHRDNPEY
LEKKRLKKQKKQKEKELAKLLSKETNASSVEPKLKLASGHLNPIEPKGSDSMTKRVDVKP
EASEGTSAAPKIRIKIKKSNA
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcgcaagcccaaaaacgacgacgctaagcccgaaagtaccggagcccta
gttcgccaccaaaagctttgcatctccatcgatatcgatcggcgccaaatctacgggcat
acggagttggaaattgcggtgccggagattggaattgtagggttacacgcggagaatttg
gggattgggagtgttttggtagacggagaggcggcggacttcgaatactacccgcgccag
cagcacgtggagagcgagaagaggtggagcgcggtgtcgacgctaagttctgcggcggat
gcggctggagcggcatatgtatcggcgcttgagagggaattggtccccaatttgttgatt
aattgctgtaagggcttcaagagtgggagtgatcagcaggccgtggcggagaacgggttt
cattcgtccggcgagactaagcagcagaatgtgagattggttcgtattgagtattgggta
gagaaggcagagacggggattcacttcaagaataatgtgctacttactgataaccagata
aggcgtgcacgctgctggttcccttgtatggatgacagttcacagcgctgctgctatgat
ttagagtttacggttgcgcaaaatcttgtggctgtcagcaatggaaccttgctataccag
gttttgagcaaggataatccccctcggaaaacatacgtatataaattaaacgttccagtt
gctgctcagtggatatctgtggcagttgcaccatttgaaatccttctggatcgccactct
acatgcataacgcatatgtgtttgtctgctaatatgtccaagcttcagaatactgtggaa
ttttttcacagtgcattcagctgttacaaggattacctttcgatggactttccatttgag
tcatacaagcaagtttttgtagagcctgagatggcagtatcctcactaagtttgggggct
tctatgagcatctttagttctcaagcattatttgatgagaaggttattgatcagaccata
gatacaaggattaaacttgcttatgcccttgcaagacagtggtttggtgtatatatcact
cctgaggcaccaaatgatggatggctgttggatggtcttgctggtttcttgactgattac
tttatcaagaaaaatttggggaataatgaagcacgttatcggcgatacaaggcaaattgt
gctgtttgcaaggccgatgatagtggtgcaactgctttgagtctctccgcatcttgtaag
gatttgtatgggacccagtgcattggcctatatggcaaaataagatcgtggaaatctgtt
gcaatcattcaaatgttggaaaagcagatggggccagagtctttccgcaatattttgcag
acaatagtgtctcgggctcaggatgcaactcgtacttcaagatctctcagtacgaaggag
ttccggcatttggctaacaaggttggaaatcttgagcgtccttttcttaaagaatttttt
cctaggtgggttggatcttgtgggtgtccagatctaaggatggggttctcctataacaaa
cggaagaatatggttgaattggcggtgttacggggatgcacagcttcaccagattccagc
gcatcagttctgaatgttaatgcagattcggaaaacagagatggtgacattggttggcct
gggatgatgagtatcagagtttatgagcttgatggtatgtatgaccatccaattctgcca
atggctggagatacatggcagttattggaaatacaatgccattccaagcttgctgccagg
cgcttccagaagcccaaaaagggttcaaaacctgatggatctgacgacaatggtgacgtt
atacctgctctagatatgcgctccagttcggaatcccccttgttatggatgagagcagac
cctgaaatggaataccttgctgaaattcattttaatcaacctatacagatgtggattaat
cagttagagaaggacagggatgttattgctcaggcacaagcaattgcaactctagaggcg
ttgccacaactttcattttctgttgttaatgccctgaatactttcctcaccgactctaag
gccttctggagacttcgaattgaggctgcttttgcattagctaattcggcatctgaggaa
actgattgggctggtttaactcatttggtgaaattttataaaagtaggagatttgatgca
aacattggactgcccaagccaaatgactttcatgactttcccgagtactttgttcttgag
gccatcccacatgctgtagctatggtcagagctgcagacaagaaaagtccaagagaagct
gttgagtttgttttacaacttttgaagtataatgacaacaatgggaatccttactctgat
gtattctggcttgctgcactagtccaggcagttggtgaacttgaatttgggcaacagagt
attctatttttaacttctcttctcaagcgcatcgaccggcttttgcaatttgacaggctg
atgcctagccacaatgggatcttaacagtgagctgtatccggaccttgacacagattgcg
ttaaagctttctgagttcatacctcttgatcgtgttgttgaacttataagaccttttcga
gatttcaagacaatatggcaagttcgaattgaagcaagcagggcgcttcttgatctagag
ttccactgcaagggcattgatgccgtgttatcattgtttatcaaatatatagaggaagag
ccatctttaagagggcagatgaaattgggtgtacatgctatgcggctatgtcagataagt
ggtggatctaattctaatgacaacataaagagccacgttcttgtgtctttactttgtcta
cttgatggccatattgcgttcaacaatgtctttcttcgccaccacctattctgcattata
caaatccttgcaggaaggcctccaactctctatggagtacccagagaaactagaacgttg
cttatgggtgatccagaaacctgcattgaacagaagaacattttttctaatctagttcct
gaagttaaacctccagaactaccttctgatatccctaatcctccagaaacaacttctcac
accccacatccttctgaaccacctcctgacatcccgaacacttcacacgatgttttggcc
attccgcaagcttccaaggaggcagatactgtttctagcggtcatgaacggaagatgcca
tctattaagatcagagttaagcaatctgctgccaccagtagaactgaggaggccgataac
caaactgttgaaaaatctcatggtgagcgacacgaaagggctagcagttctgtttctgtg
gatgcaccccaaaggaattttgccgaggctgtgagcattagcaaccaaaatcttgaggaa
gttaactcatgtcatgatcgtgggtcccgaatgactgccagcattggtagtgcaaaacct
gcaagtgacggtgacgaaattggaaaagaactccagtgcactgctgattcgagcaaagtt
tctgtacaacccgaggctgatattccattaccatccagcttcattcacgataacagtgta
gatgctgaagctcacaaatatgcatctcttcaatctctttgtagacctggtcttgatggc
ggttcgcttggcataactgattcttctctgcatgggaaagagaagaaggagaagaagaaa
gacaaggagaagaaaaggaagcgggaagaaaataaagggcaccgagataaccctgagtat
ttggaaaagaagcgtttgaagaagcagaaaaagcagaaagaaaaggagttggcgaagctg
ctgagtaaggagacaaatgcatcttcagtagaacctaaacttaagttggcatctgggcat
ttgaatccaattgaacccaagggatccgacagcatgaccaagagggttgatgtcaagcct
gaggcatcagaaggcacttctgctgctccgaaaatccgaatcaaaataaaaaaatcgaac
gcttaa
DBGET
integrated database retrieval system
