Corylus avellana (European hazelnut): 132183715
Help
Entry
132183715 CDS
T09426
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 2
KO
K03255
protein TIF31
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cave03012
]
132183715
Translation factors [BR:
cave03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
132183715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
TPR_8
CLU
PAM2
Motif
Other DBs
NCBI-GeneID:
132183715
NCBI-ProteinID:
XP_059453096
LinkDB
All DBs
Position
ca6:complement(26807925..26821105)
Genome browser
AA seq
1868 aa
AA seq
DB search
MAPKTGKTKPHKAKGEKKKKEEKVLPNVIEITVETPEDSQVTLKGISTDRILDVRKLLGV
HVETCHLTNFSLSHEVKGPRLKDSVDILSLKPCHLSIVEEEYTEDLAIAHIRRLLDIVAC
TNSFGPSSSSPKAAGRAAQPKEPGIGEAEPSPSLTSDNGGDSTHKKSSGAQRVGGPVLNK
SGPDGTERADAAAVSMYPPPRLGQFYEFFSFSHLTPPVHYIRRSTRPFLEDKTEDDFFQI
DVRVCSGKPTTIVASRKGFYPTGKHPLLSHSLVGLLQQISRAFDAAYKGLMKAFTEHNKF
GNLPYGFRANTWVVPPVVADNTSVFPPLPMEDENWGGNGGGQGRDGKYDYRQWAKEFAIL
AAMPCKTAEERQIRDRKAFLLHSLFVDVSVFKAVAAIKHLIDSNPTISTSHEERVGDLNI
KVTRDVPDASTKLDCKNDGSHVLGMSQEELARRNLLKGITADESATVHDTSTLSVVVVRH
CGYTAVVKVSAEVNWEGNPIPQDIDIDDQPEGGANALNVNSLRMLLHKPSTPQSSSTGQR
VQSADIESLRGARSLVRKVLEESLQKFQEEPTKQTRSIRWELGACWVQHLQSQASGKTES
KKAEETKPEPAVKGLGKQGGLLKEIKKKTDVKSSKAELGKEVSMNNNLDINKRSENISQQ
ELEKQDKEKEMMWKKLLPEPAYLRLKESETGLHHKLPEELTEMAHNYYADTALPKLVADF
GSLELSPVDGRTLTDFMHTRGLQMCSLGRVVELADKLPHVQSLCIHEMVVRAYKHILQAV
VAAVDNVADLAASIASCLNLLLGTPSLENPDVDITKDDKLKWKWVEAFLLKRFGWHWKCE
SSEDLRKFAILRGLCHKVGLELVPRDYDMDSALPFRKSDIISMVPVYKHVACSSADGRTL
LESSKTSLDKGKLEDAVNYGTKALSKLVSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATI
YQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHP
NTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEA
YSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFESKALEQQEAARHGTPKPDASISS
KGHLSVSDLLDYITPDADMKAREAQKKARAKIKGKPGQNWDTISDEYQKDEILSSSFPIA
ENSSDKENTAEAQFAEPRDDKPDSILSDQSVLIKNDDVAQDDTSDEGWQEAVPKGRSPTA
RKSSSSRRPSLAKLNTNFMNVPQSSRYRGKSTNFASPRTTQNEPVASTGPAPPVTKNFAK
SASFSPKLNNSSTSTSGAEKLANPKSAPASPASTDQVAKSAPAASPISVKAAGKLFSYKE
VALAPPGTIVKAVAEQLPKGNLPKEQNPQVSQEAAVTDPSPGEVTIVKDAKEEKVDKPKG
EKHLQVSKEETKGKVNEEEKQGKKVDFVGSKPLEVVKSAAKDIKVGGKKVELKSDAVKDT
EAETGSVAVLEVENPDISQGLKASTSKSEVLGVGPDGCSETSPDKDAPISEEKVADGDEN
NVDSGVKPKPTEGEKQDEAEPGKETTKKLSAAAPPFNPSTIPVFGSVPVPGFKDHGGILP
PPVNIPPMLTVNPVRRSPHQSATARVPYGPRLSGGYNRSGNRVPRNKAGFHNGEHNGDGN
QFSPPLIMNPHAAEFVPGQPWVPNGYPLSPNGYLTSPNGFPMSPNGVPVSPNGYPASVNG
IPVTQNGFPVSPISSVESPTVVNGDNGVENKDEAAVEVEAEASTEKSFTEVDEKPPIEQK
SQEDQAVDNENNHPEVEEKTTDIVPIAAAAVDTVVASETCNIAVVEEKPTKCWGDYSDSE
SEIVEVTS
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaaacaggcaagacgaagccccataaagccaagggagagaagaagaagaag
gaagagaaagttttgcccaatgtaattgagattacagttgaaacaccagaagactcccaa
gtgaccctcaagggaatctccactgacaggattttagatgtgagaaagctgttgggagtc
catgtcgagacgtgtcatttgaccaacttctccttatcacatgaggtcaaaggaccgcgg
ctgaaagattcggtggacatcctctctctcaaaccctgccacctctccatcgtggaagag
gagtatacagaagatcttgcaatcgctcacatcaggcgactcctcgacattgtggcctgc
accaactcgtttgggccgtcgtcctcgtcgcccaaggcagcgggccgagcggcccagcct
aaagagcccggcataggggaggccgagccttctccgagcctgacctcggataatggtgga
gattcgacccacaagaaatcaagcggggcccagcgagttggcggccccgtgcttaacaag
agcgggcctgatgggaccgagcgagccgatgccgcggccgtgtcgatgtacccgccgccg
aggctcggccagttctacgaattcttctcgttctcgcatctaacgccgccggtgcattac
attcgaagatctactcgtcccttccttgaagataaaacagaagatgatttctttcaaatt
gatgttcgagtttgcagcgggaagccgacgacaattgttgcttccagaaaggggttctac
cctactgggaaacaccctcttctcagtcactctttggttggtttgctgcagcagataagc
agggcttttgacgccgcgtacaaaggccttatgaaagctttcacagagcataataaattt
ggcaatcttccttacggttttcgggcaaatacatgggttgtgcccccagttgttgctgat
aacacatctgttttcccgccacttcccatggaagatgaaaactggggaggaaatggcggt
gggcaaggaagagatggaaaatatgactacagacagtgggcaaaggagtttgccattctg
gcagccatgccttgtaaaacggcagaagaaaggcaaattcgagaccggaaagcctttctg
cttcacagtttattcgtcgacgtgtcagtttttaaagctgttgcagcaatcaagcatctt
attgacagtaatcctaccatttcaacctcgcatgaggaaagggttggagatttaaatatt
aaggtgacaagagatgtacctgatgcaagcacgaagttggattgcaaaaatgatgggagt
catgttcttggaatgtcacaggaagagcttgctcggagaaatttactcaaaggcataact
gctgatgagagtgctactgttcatgatacttctactttaagtgttgtggtagttagacat
tgtggctatacggctgttgtgaaagtttcagctgaagtgaactgggagggtaatcctatc
ccccaggacattgacattgatgaccagcctgaaggaggtgccaatgccttgaatgtcaac
agcttgagaatgctattacacaagccatccactcctcaatcgtctagtacaggtcaacga
gtacagagtgcagacattgaaagtttacgtggtgctaggtctttggttaggaaagtatta
gaagaaagtttgcagaagtttcaggaagagcccactaaacagactaggtctatcagatgg
gagctcggagcatgttgggtgcaacatttgcaaagccaagcttcagggaaaactgagtct
aagaaagctgaagaaactaagcctgagccagctgtaaagggccttgggaagcaaggtgga
ctgctaaaggagataaagaagaaaacagatgtcaaaagcagcaaagctgaactggggaag
gaagtttctatgaataacaaccttgacataaacaagagatcagaaaacattagtcagcag
gaattggagaagcaagataaggagaaggaaatgatgtggaaaaagctacttcctgaacca
gcatatttacgccttaaagaatcagagaccggtcttcatcataagctgcctgaggagttg
actgaaatggctcacaattactatgctgatactgcacttccaaagctggtggcagatttt
gggtcccttgaactttcgccagttgatggaaggacattgacagattttatgcacaccagg
ggtttgcaaatgtgttccctagggcgtgtggttgaacttgcagataagcttcctcatgtt
caatcactctgtatacatgagatggttgttcgagcctacaagcacatattgcaagctgta
gtagcagcagttgataatgttgctgacttggctgcgtcaatagcatcatgtttaaattta
ttattaggaacaccatcacttgaaaaccctgatgtggatattactaaagatgataagtta
aaatggaagtgggtggaagcattccttttgaagaggtttggttggcattggaaatgtgaa
agctctgaggatctgagaaagtttgccattctccgtgggctgtgccacaaggttggactt
gagcttgttcctagggactatgatatggacagtgcattaccttttaggaagtcagatatc
attagcatggtccccgtttataagcatgttgcatgttcctctgctgatgggcgtacattg
ttggagtcttcaaaaacttccttggacaaaggcaaattggaggatgctgttaattatggc
acgaaggcactctcaaaacttgtgtctgtctgtggtccttatcatcgaatgacagctgga
gcatatagtcttttggctgtagttctctaccatacaggggattttaatcaggcgaccatt
tatcagcaaaaagcattggatattaatgagagagagcttggacttgatcaccctgataca
atgaaaagttatggagatctagctgttttttactatcgacttcagcacacagagttggct
ttgaagtacgtcaatcgtgctctgtatctcttgcacttaacatgtgggccttctcatcca
aatactgctgccacttacatcaatgtagcaatgatggaagaaggtttggggaacgtccat
gttgctcttaggtatctccatgaggcattgaaatgtaaccaaagactacttggggctgat
catatacagactgctgccagttatcatgcaatagcaattgctctctctttgatggaggca
tactccttaagtgttcagcatgaacagactaccctacagatactgcaggccaaactaggg
tccgaggatctacgaacacaggatgctgctgcatggcttgagtactttgagtccaaggct
ctggagcaacaagaagctgcacgccatggtaccccaaaaccagatgcctcaatctccagc
aaaggtcatttgagcgtatcggaccttttggattacataacgccagatgcagacatgaaa
gcgagagaggcccaaaagaaagctcgtgccaagatcaaaggcaaaccaggccaaaactgg
gatacaatctcagatgaatatcagaaggatgaaattttgtcgtcaagttttcccattgca
gaaaattcaagtgataaagaaaacacagccgaagctcagtttgcagaacctagagatgac
aaacctgattcaatcctttctgatcaatccgtactgataaaaaatgatgatgtggcacaa
gatgacacctctgatgaaggatggcaagaagccgttcctaaaggtcgctcacctacagct
cgcaagtcttctagttcaaggaggccaagcctagcaaaactaaataccaacttcatgaat
gtaccccagtcatcaagataccgtggaaagtccactaatttcgcatccccaagaacaacc
caaaatgagcctgttgcttcaactggacctgctccacctgttacaaagaattttgctaag
agtgcaagcttcagtccgaagttgaataactctagcacctcaactagtggggcagagaaa
ttagccaacccaaagtcagcccctgctagcccagcttccactgatcaagttgctaagtct
gctcctgctgcaagtccgatcagtgttaaggcagctggaaaacttttctcctacaaagaa
gttgctttggctccacctggaacaattgtgaaggcagtggcagaacagttgccaaaagga
aatcttcccaaagaacaaaatcctcaggttagccaggaggcagctgtgacagatccctct
cctggtgaggtgacaatagtaaaggacgcaaaggaagaaaaagttgataaacccaaagga
gagaaacatctacaggtttctaaggaggaaacaaaaggcaaggtcaacgaagaagaaaaa
caaggaaaaaaggttgactttgtgggatcaaaaccccttgaggttgtgaagagtgctgct
aaagatatcaaggtgggaggtaaaaaagtagaattaaagagtgatgctgttaaagacact
gaagcagaaactggaagtgttgcagttctcgaagttgagaatcctgatatctctcagggt
ttgaaggccagtacttctaaaagtgaagtgttgggagtggggccagatggttgctcagaa
acttctcctgataaagatgcccccatttctgaagaaaaggtggcagatggagatgaaaat
aatgttgactcaggtgttaagccaaagccaactgaaggtgaaaaacaagatgaagcagaa
ccaggaaaggagacaaccaagaaactttctgctgctgcacctccatttaatccatccaca
attccagtcttcggctcagtcccagttccaggatttaaagatcatggaggaattctgccc
ccaccagttaatattcctcctatgcttacagtcaatcctgtccgtagatcacctcatcag
tcagcaacagcgagggttccatatggtccccggctatctggtggctataacagatcagga
aatcgggttccacgcaataaagctggcttccacaatggcgaacacaatggagatgggaat
cagttcagccctcctttaataatgaacccccatgcagctgagtttgtacctggccaacct
tgggttcccaatggctatccactatctccaaatggttatttgacttctccaaatggtttc
cccatgtctccaaatggtgttccggtgtcaccaaatggatatccagcatcagtaaatggt
attccagtgactcaaaatgggtttccagtatctccaatcagttcggtagaatcaccaaca
gttgtaaatggtgacaatggtgttgaaaacaaagatgaggctgcagtggaagtggaggcg
gaagcgagtaccgagaagtcatttacagaagttgatgaaaaaccaccaattgagcagaaa
tcgcaagaagatcaagctgtagacaatgaaaacaatcatcctgaagttgaagaaaagact
acagatatagtcccaattgctgctgctgctgttgacactgttgtggcaagtgaaacttgc
aatattgctgtggttgaggaaaaaccaaccaaatgttggggagattacagtgacagtgaa
tccgagatcgttgaagttacaagttga
DBGET
integrated database retrieval system
