Corylus avellana (European hazelnut): 132183720
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Entry
132183720 CDS
T09426
Name
(RefSeq) WD-40 repeat-containing protein MSI3-like
KO
K10752
histone-binding protein RBBP4
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03082
ATP-dependent chromatin remodeling
cave03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132183720
03083 Polycomb repressive complex
132183720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cave03036
]
132183720
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
132183720
Histone modification proteins
HAT complexes
HATB complex
132183720
HDAC complexes
Sin3A-HDAC complex
132183720
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
132183720
PRC2.2
132183720
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
132183720
Heterochromatin formation proteins
Other heterochromatin formation proteins
132183720
Chromatin remodeling factors
NuRD complex
132183720
NuRF complex
132183720
NuRF complex (fruit fly)
132183720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD_LRWD1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SPT8
ANAPC4_WD40
MIOS_WD40
Beta-prop_NUP159_NUP214
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
AftA_N
Motif
Other DBs
NCBI-GeneID:
132183720
NCBI-ProteinID:
XP_059453102
LinkDB
All DBs
Position
ca1:31856583..31860629
Genome browser
AA seq
414 aa
AA seq
DB search
MAEEQQPQQKEAGLDGQVDEDYAVWRKNTPFLYDLVISHPLEWPSLTVHWAPLPAPLPHA
SDPSLAVHRLVLGTHTAEGSPNFLMVADALLPREASEASLDGNAENPIVPKVEITQKIRV
DGEVNRARCMPQNPVIVGAKTSGSEVYVFDCTKQSGRQQGSDCDPDLRLRGHDMEGYGLS
WSPLKEGYLLSGSHDHKICLWDVSAVAQDRVLDALHVYEAHESVVEDVSWHSKNENLFGS
VGDDCQLIIWDLRTNQPQHSVKAHEKEVNYLSFNPYNEWILATASSDTTIGLFDTRKLSV
PLHVLSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQSEGDAEDGPPELLF
SHGGHKAKISDFSWNKYQPWVIASVGEDNTVQVWQMAEGIYHDDDDVQATDDSP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaacaacaaccacaacagaaagaggcgggtctcgatggccaggtggacgag
gactacgccgtgtggaggaagaacacgccgttcctctacgacctggtcatctcgcaccct
ctcgaatggccgtctctcaccgtccactgggccccgcttccggccccactgccccacgcc
tccgacccatctctcgccgtccacaggctcgtcctcgggacccacacggccgagggctcc
cccaacttcctcatggtcgctgacgctctcctccccagagaagcgtcggaggccagctta
gatggcaacgccgaaaaccctatagtccctaaggtggagataacacagaagatacgcgtt
gatggagaagtgaatagggcacggtgtatgccgcagaacccggtaattgtgggtgcaaag
acaagtgggtctgaggtttatgtgtttgattgcaccaaacaatcggggaggcaacaaggg
agtgattgtgatccagatttgaggctaaggggtcatgatatggaagggtacgggttgtct
tggagtccccttaaggagggataccttttaagtggctcacatgaccataaaatatgtttg
tgggatgtgtctgctgtggctcaagatagggtgcttgatgcgttgcatgtttatgaggct
catgaaagtgtggttgaagatgtctcctggcactcaaagaatgaaaatttatttggatct
gtgggggatgattgtcaattgataatttgggacttgcgcacaaaccaaccccaacattct
gtcaaagcccacgagaaagaggtgaactatctttccttcaatccatacaatgaatggatc
ttggctacagcatcttcggataccaccattggtctctttgatacaaggaagctgagtgtg
ccattgcatgttttaagcagtcacacagaggaagtattccaggtagaatgggatcctaac
catgagacggtgttggcatcgtctgctgatgatagaaggttgatggtttgggatcttaac
aggattggagatgagcagtcagagggagatgctgaagatggtcctccggagcttctattt
tctcacgggggtcacaaagcaaagatatcagatttctcgtggaacaagtatcagccatgg
gtgattgcaagtgtgggtgaggacaacactgttcaggtctggcaaatggctgagggcata
tatcatgatgatgacgacgtgcaagctactgatgactcaccatag
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