KEGG   Corylus avellana (European hazelnut): 132183825
Entry
132183825         CDS       T09426                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
cave  Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:cave00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cave04812]
    132183825
Cytoskeleton proteins [BR:cave04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     132183825
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_SPT8 eIF2A WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_WDR19_1st PROPPIN Beta-prop_RIG_1st VPS8_N PAN2_N
Other DBs
NCBI-GeneID: 132183825
NCBI-ProteinID: XP_059453253
LinkDB
Position
ca6:62171..76140
AA seq 804 aa
MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKCHEGQVQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETTGVRCLTFNPDGR
TLLCGLHESLKVFSWEPIRCHDGVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDILR
IEPYAISNVTRSNGHSESKSSSSGSLSVLNENTAKATLGRLSVSQNSDPLVNETKSLGRL
SVSQNSDPIKEPKVLASAGSIPGTPQRIGLNASPKIMPASSMAVPSGAASKRSSTKAQST
SGVPILNKLDVIPVIVPRTNMRSEQAAESRKEVGIAGRTMPFSLQSKATDFRKFPNSRDE
VDKPIVSALPELTGSKAPELSSGADRNIFPAVKSSIQGISAAEKSIKDDRFIGSGKHEMN
STTEPAANYQHESYDTRGHKVSRDACSIESKKGGKTRSLVVNWEKRERSPTYEGSTSSIP
PGTVSAANMLPFNAFKHRGYPPSAEKETVSASDEDAIADVMEQHDQFISSMQSRSAKLQV
VYRYWERSDVKGVVGAMEKMADHAVVAEVVSIMTDKIDIVTLDICTCLLPLLTCLLESNM
DRHLSISLDMLLKLIRIFGSVIYSTISASTSVGVDIEAEQRLERCNLCFMELEKVKRCLS
ALTRRGGSVAKSAQELNLALQEVS
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgaccaccaaacgcgcctacaagctacaggaatttgttgcacattcttccgctgtcaat
tgcctcaagattggcaggaagtcgtccagggttctagtcaccggaggagaggatcacaag
gtcaatctatgggctattggcaaacccaacgccatcctgagtttgtctggacatacaagt
ggaattgattccgtaagctttgattcttcagaggtgttagttgccgcaggagctgcaagt
ggtacaatcaagctttgggatttagaggaggctaagattgttcgtacacttactggtcac
agatctaattgcatatctgtggactttcatccctttggagagttctttgcatctggctct
ttggatacgaatcttaagatatgggatatcagaaagaaagggtgtatccacacgtacaag
ggccacactcgaggggtgaatgcaatcagatttaccccagatggccgttgggttgtatct
ggaggagaggacaacacagtgaagttgtgggatctgactgctggaaagcttttgcatgat
ttcaagtgtcatgagggccaagttcagtgcatagactttcatccacatgagtttttgctg
gcaacgggttcagcggataggactgttaaattttgggaccttgaaacgtttgagcttatt
ggttcagcaggacctgagacaactggagttcgttgtctcacttttaatcctgatgggagg
accctactatgtggattgcatgaaagcttgaaggttttctcgtgggagccaataagatgc
catgatggtgtggatgtgggatggtctagattgtcagatcttaatgttcatgagggaaag
cttcttggctgttcatacaatcagagttgtgttggagtatgggttgtagacatattgcgc
atagaaccatatgcaattagtaatgttaccagatcaaatggccattcagaatctaaatct
tcttcaagtgggagtctgtcagtactaaacgagaacactgctaaggccactctgggtcga
ctatctgtttcccaaaattcagatcctttagtgaatgagacaaaatctcttggaaggttg
tcagtttcccaaaattcagatcctattaaggagccaaaagttttggcatccgcaggaagt
atacctggtactcctcagaggattggtttgaatgccagtccaaaaataatgccagctagt
tctatggcagttcctagtggagcagcttcgaagaggagttccaccaaggcccagtcaaca
tccggtgttcccattcttaataaattggatgtgatacctgtaattgttcccaggaccaat
atgaggtcagagcaagcagctgagtccagaaaagaagttggtatagctggaagaacaatg
ccgttctctctgcagtcaaaggctactgatttccgaaagtttccaaatagcagagatgaa
gtggataagccaattgtctctgccctgcctgaactcacaggttcgaaggctcccgaattg
agcagtggtgcagataggaatatctttcctgcagttaaaagctcaattcaaggaatatct
gctgctgagaagagcattaaggatgacaggtttattggatctggcaagcatgaaatgaat
tcaactactgagccagctgctaactaccagcatgaaagttatgatactcggggacataag
gtgagcagagatgcatgttctattgaaagtaaaaaaggaggcaaaactcgctctcttgtt
gtgaattgggagaaaagagaaagatctcctacttatgagggatctacttccagtattcct
cctggcactgtgtctgcagctaacatgctccctttcaatgcatttaaacatagagggtat
cctccatctgctgagaaagaaacggtatctgctagtgatgaggatgctattgcagatgta
atggaacaacatgaccaatttatcagttctatgcagtctcgttcagccaagttacaggtg
gtttacagatattgggaaaggagtgatgttaagggggttgttggtgcaatggagaaaatg
gctgatcatgctgttgttgctgaggtagttagcattatgacggacaaaattgacattgtc
acattggatatttgcacttgtcttctgccacttctcacatgccttcttgaaagtaacatg
gataggcatctaagcatctctttggacatgctgcttaagctgatcagaatatttggttca
gttatctattcaacaatatcagcatcaacatccgttggtgtagatattgaggcagagcaa
aggctggagcgttgcaacttatgctttatggagcttgaaaaagtcaaacgctgcctatct
gcccttaccagaagagggggatcggttgcaaagtctgcacaggagttaaatctagctctc
caggaagtttcgtga

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