Corylus avellana (European hazelnut): 132184221
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Entry
132184221 CDS
T09426
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132184221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132184221
03036 Chromosome and associated proteins [BR:
cave03036
]
132184221
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132184221
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132184221
PBAF complex
132184221
GBAF(ncBAF) complex
132184221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Zn_ribbon_2
DUF4923
Motif
Other DBs
NCBI-GeneID:
132184221
NCBI-ProteinID:
XP_059453751
LinkDB
All DBs
Position
ca6:1126919..1135930
Genome browser
AA seq
798 aa
AA seq
DB search
MPASPSFPSETRTRWKKRKREPQINRRAPKHEDEDDDEEEPAHDDDGVELQDDPEEPQSG
AVSLHESEVLSDGGARVCDFPLVVKHTVNRPHSSVMAIVAAERVNQSGESGKRAQQLQAA
LLALENVSYGQLQALSAVPADAPVFDQDRTDGAGSSSSFVITPPQIMEGRGVVKRFGSRV
LVVPMHSDWFSPATVHRLERQVVPHFFSGKSPDQTPEKYMECRNYIVAKYMENPEKKLMI
SECQGLVVGVDNEDLARIVRFLDHWGIINYCAAAPSCETWNGGSYVREELNGDIHVPSAA
LKSIDSLIKFEKPKCRLKVADVYSSLSSHDSHASDLDNRIRERLSENHCNCCSRALPTVY
YQSQKEIDTQLCSDCFQEGRFVTGHSSIDFMRVDATNDYGDPDGENWTDQETLLLLEAME
IYNENWNEIAEHVGTKSKAQCILHFLRLPMENGLLENIEVPGVSSNSLNGDDRGRPNSNY
NGDSAGSCHQDADSESRLPFANSGNPVMALVAFLASAIGPRVAAACAHASLAALSEDNGL
SASGRNLQMEGSGHGNRMNSESMHSRESGRHGVIANSIQQKASEENSGLHGSWSQNEAQV
PLSAEKVKAAAKAGLAAAATKAKLFADHEEREIQRLSANIVNHQLKRLELKLKQFAEVET
FLMKECEQVERTRQRIAADRGRLISARCGPAGVTSPMSVPGVGPSMVNNNTSNNRQQIAS
APPSQPSIPGYGNNQQVHPHMPFMQRQQMFGLGPRLPMAAIQQSSAGSNVMFNASGNAQP
TMNHPILRPVSGTNSGLS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttccccttccttcccctcagagactcgcacgcgatggaagaagcggaagaga
gagccccaaatcaaccggagagcaccgaagcacgaggacgaagacgacgacgaggaagag
cccgcccacgacgacgacggcgtagaactacaggatgatcccgaggagccgcaatccggc
gccgtttcgctccacgagagcgaagtcctctccgacggtggggcacgcgtctgcgacttc
cctcttgtggtcaagcacacagttaatcggccccactcttcggtcatggccatcgtggcc
gccgagcgggtcaatcagagcggagagagtggcaagagggctcagcagctccaggctgct
ttgctggccttggagaacgtgtcgtacgggcagctccaggcgctgtccgctgtgcccgcg
gacgctccggtgttcgatcaggatcggacggacggcgccggttcaagttcatcgtttgtg
atcacgccgccccagatcatggaaggtcgcggcgtcgtcaagcggttcgggagcagggtt
ctcgtggttccaatgcattcagattggttttcaccggctacggtgcatcgactggagagg
caagtggtgccacatttcttctctgggaaatcaccagaccagacgccagagaaatacatg
gaatgtaggaactacattgttgccaaatacatggaaaatccagaaaagaagctcatgatc
tctgagtgtcaaggattggtagttggtgttgataatgaagatttagctcggattgttcgg
tttcttgatcactggggaatcatcaattactgtgctgcagcaccaagttgtgagacttgg
aatggtgggtcctacgttagggaggaactaaatggtgatatccatgtgccgtcagctgct
ctaaagtccattgatagtttaatcaaatttgagaagcccaaatgtaggctcaaagtggct
gatgtttattcatcattgtcatctcacgattctcatgcctctgatttggacaacagaatc
cgagagcgtctgtctgaaaatcactgcaattgttgttctcgggcccttcccacggtttac
tatcagtcacagaaggagattgatacgcaactatgctctgattgcttccaagaggggagg
tttgttactggccattcaagcatagattttatgagggtggatgcaacaaatgattatggt
gacccagatggggaaaactggactgatcaggaaacattacttctacttgaggcaatggag
atttacaacgagaattggaatgaaattgcggagcatgtcggtaccaagtcaaaagcacaa
tgcattcttcactttcttcgtctacctatggagaatggcctactggaaaatattgaagtt
ccaggcgtgtcatctaactcgttaaatggagatgatcgtggaagaccaaattcaaattat
aatggggattcagcaggatcctgccatcaagatgctgattctgaaagcaggctccctttt
gcgaattccgggaatccagttatggctctggttgcatttttggcctctgctattggacca
agagttgctgcggcatgtgcacatgcatccttggcagcattgtcagaggacaatggctta
tctgcttctggaagaaatttacagatggaaggttctgggcatggtaataggatgaattca
gagagtatgcatagcagagaaagtggtcgtcatggagtaattgcaaattcaatccagcaa
aaagcttcagaggagaactctggactacatggttcatggagtcagaatgaggcacaggtt
ccattatctgcagagaaagttaaagctgctgctaaagctggccttgctgctgcagcaaca
aaagcaaaactgtttgcagatcatgaagaacgggaaattcaaaggctatctgcaaatata
gtaaaccatcagttgaaaagattggagctgaagctgaagcagtttgctgaagtggaaacg
tttttgatgaaagagtgcgaacaagtggagaggacaaggcagaggattgctgctgaccgg
ggccgcttgatatcagctcgatgtggacccgctggcgtcacttcacccatgagcgttcca
ggtgttggtccttctatggtgaacaataacaccagcaacaataggcaacaaattgcctca
gctccaccttcacaaccaagcattccaggatatggcaacaatcaacaagtccatccccac
atgccgtttatgcaacggcagcaaatgtttgggttggggccaaggctgcccatggcagca
atacagcagtcctcagctggttcaaatgtcatgttcaatgcctccggtaatgcgcagcct
actatgaatcatccgattctgcggcccgtatcgggtactaactctggtttaagttga
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