Corylus avellana (European hazelnut): 132184234
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Entry
132184234 CDS
T09426
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132184234
04121 Ubiquitin system [BR:
cave04121
]
132184234
Enzymes [BR:
cave01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132184234
Membrane trafficking [BR:
cave04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
132184234
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132184234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
DUF7573
zf-C3HC4_3
Zn_ribbon_8
HypA
DZR
CxC4
zf-Nse
zf-RING_16
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
132184234
NCBI-ProteinID:
XP_059453771
LinkDB
All DBs
Position
ca6:complement(11162589..11172972)
Genome browser
AA seq
379 aa
AA seq
DB search
MSNSGGNPVGGGGGAATSTSAAPQLYFCHQCGRTVTLIPSPSSDLACPDCHGGFLEELEN
PNPFPNPMPFHNSFFTSSSSDLPGAHPLLFSASPNAVPMFNDLSALFGASAGAARTSPFE
EPDAFNPFVFLQNYLQTLGGNVEVVINSAGDTGFRSGVASPNVNLGDYFFGPGLEQLIQQ
LAENDPNRYGTPPASKSAVQALPDVKISEDLLASDSSQCAVCKETFELDEEAKQMPCKHI
YHADCILPWLELHNSCPVCRHELPTDDPDYEQRTLRRSVSLGAGNQTAAAGAGTGAGGSG
IADQSQAEGSGENPPTPRTAERRFRISLPFQWPFRAFGSPAETSNSGSGNNNASNDGEGN
PGNRGNQNFQSETREEDLD
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattccggcggaaaccccgttggcggaggaggcggcgcagccactagcacctca
gcggcgcctcagctctacttctgccaccagtgcggccgtactgtgaccctcatcccctct
cctagctccgatctcgcctgccccgattgccacggcggcttcctcgaagaactcgaaaac
cccaaccctttccccaatcccatgcccttccacaattccttctttacttcctcctcctct
gacctccccggcgcccatcccctcctcttctccgcctcccccaacgccgtccccatgttc
aacgatctctctgccctcttcggcgcctcggcgggcgccgcccgcacctcgcccttcgaa
gaacctgacgccttcaacccctttgttttcctacagaactacctccaaaccctaggcggc
aacgttgaggtcgtcattaactcggccggcgacacaggattccgcagcggtgtcgcttcg
cccaacgtcaatctcggtgactatttcttcggaccgggcctcgaacaactgatccaacag
ctggccgagaacgatccaaaccggtacgggacgcccccagcatcgaaatcggccgtccag
gcgttgccggacgttaagatttcagaggatttgttggcttcggattcgtcgcagtgcgcg
gtgtgtaaggagacgttcgagctggacgaggaggccaagcagatgccgtgtaagcacatt
taccatgcggattgtattctgccttggttggaactgcataattcttgtcctgtatgtcgc
catgagctgccgaccgatgatcccgattacgagcaaaggactcttagaaggtctgtgtct
ttgggggctgggaatcagacagcggctgctggtgctggtactggtgctggtggcagtggt
attgccgatcagagtcaggctgagggttctggagagaatccgccgaccccgaggaccgcg
gagaggaggtttaggatctcattaccatttcaatggccatttagggcgttcgggtcacct
gccgagacaagcaatagtgggagtggcaacaacaatgcaagcaatgatggtgaagggaat
cctggaaatagaggaaatcagaacttccaatcagagaccagagaggaagatcttgactga
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integrated database retrieval system
