KEGG   Corylus avellana (European hazelnut): 132184318
Entry
132184318         CDS       T09426                                 
Name
(RefSeq) exosome complex component RRP41 homolog
  KO
K11600  exosome complex component RRP41
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    132184318
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cave03019]
    132184318
Messenger RNA biogenesis [BR:cave03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     132184318
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     132184318
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 132184318
NCBI-ProteinID: XP_059453884
LinkDB
Position
ca6:29711010..29719305
AA seq 241 aa
MEYVSPEGLRLDGRRPMEMRQIRAEIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ
QMNDKALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIF
VQVLQADGGTRSACINAATLALADAGIPLRDLVTSCSSGYLNSTPLLDLNYVEDSAGGPD
VTVGFLPKLDKVTLLQMDSKLPIDIFENVMQLAIEGCKAVANYIREILLENTKQLEYRRG
L
NT seq 726 nt   +upstreamnt  +downstreamnt
atggagtacgtgagccctgaaggccttcgcttagatggtcgccgtcccatggaaatgagg
caaattcgagcagagattggtgccgtggccaaagctgacggttctgctgtgtttgagatg
ggtaacactaaagtgattgctgcagtatatggccctagagaggtccaaaataggagtcaa
caaatgaatgacaaggccctggtgcgatgcgagtatagcatggctaattttagtactggg
gatcgcatgagaaaaccaaagggtgacaggcgatccacagagatatctttagttattcgc
cagaccatggaagcttgcatattgacacatttgatgcctcggtctcagatagatattttt
gtccaagtactccaagcggatggaggaactagatctgcatgtatcaatgctgcaacttta
gcccttgcagatgctgggatcccattgcgggatcttgttacttcatgtagttccgggtac
cttaatagcactcctctgcttgatttgaactacgtagaagatagtgctggaggtcctgat
gtcactgtagggtttctccctaagttggacaaagtgacccttcttcagatggattctaag
ttaccaatagacatttttgaaaacgtcatgcaacttgcaattgaaggctgcaaagcagta
gcaaattacattcgagaaatattgctagagaataccaagcaactagagtatcgtcggggt
ctatag

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