KEGG   Corylus avellana (European hazelnut): 132184500
Entry
132184500         CDS       T09426                                 
Name
(RefSeq) uncharacterized protein LOC132184500
  KO
K12828  splicing factor 3B subunit 1
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132184500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cave03041]
    132184500
   03036 Chromosome and associated proteins [BR:cave03036]
    132184500
Spliceosome [BR:cave03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    132184500
 Complex B
    132184500
 Complex C
   U2 SnRNP specific factors
    132184500
Chromosome and associated proteins [BR:cave03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    132184500
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N
Other DBs
NCBI-GeneID: 132184500
NCBI-ProteinID: XP_059454134
LinkDB
Position
ca6:215548..219675
AA seq 1269 aa
MDPEIAKTQEERRRMEQQLASLTSVTFDTDLYGGNDRDAYVTSIPVNEDDENIDTMDNEV
ARKLASYTAPKSLLKEMPRGGAEDDNDDLLGFKKPQRIIDREDDYRKRRLNRVISPERHD
AFAAGEKTPDPSVRTYADVMREEALKREKEETLKRIAKKKEEEEAAVKENKAADDKGPKR
RNRWDQSQDEGAAAAAKKAKTTSDWDLPEETTPGRWDATPTPGRLGDATPSASVGRRNRW
DETPTPGRLADATPAGGATPGATPAGMTWDATPKLSGLATPTPKRQRSRWDETPATMGSA
TPMAGATPSAAAAAFTPGITPVGGVDLATPTPGAINLRGSITPEQYNLLRWEKDIEERNR
PLTDEELDSMFPQEGYKILEPPASYVPIRTPARKLLATPTPLGTPLYSIPEENRGQQFDV
PKEAPGGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTAL
RQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILV
VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVA
SALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLLD
ENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPL
MDALYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVDAEYIRNDVLPEFFR
NFWVRRMALDRRNYRQLVETTVEMANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVV
ANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGT
IKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILG
ALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREW
MRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVA
IAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLED
ALMDRDLVHRQTAASAVKHMALGVAGLGCEDALIHLLNYVWPNIFETSPHVINAVMEAIE
GMRVALGAAIVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPVLEDEHSNVY
SRPELMMFV
NT seq 3810 nt   +upstreamnt  +downstreamnt
atggacccggagatcgcgaagacccaggaagagcggaggcgcatggagcagcaactggcg
tccctgacctccgtcaccttcgacaccgacctatacggcggaaacgaccgcgacgcctac
gtcacgtctatccccgtcaacgaggatgacgagaacatcgacaccatggacaacgaggtc
gcccgcaagctcgcctcctacaccgcacccaagtccctccttaaggaaatgccccgtgga
ggagccgaagacgacaacgacgaccttctggggttcaagaagcctcagcgcatcatcgac
cgcgaggacgactaccgcaaaaggaggctcaaccgcgtgatctctcccgagagacatgac
gccttcgccgccggggagaagaccccggacccctcggtcagaacctacgccgacgtcatg
agggaggaggcgctcaagagggagaaggaggagactctcaagaggatagccaagaagaag
gaggaagaggaggccgccgtcaaggagaataaggctgctgatgataagggtcccaaaagg
aggaataggtgggaccagtcccaggacgagggggctgctgcggcggccaagaaggccaag
acgacatcggattgggacttgccggaggagacaaccccggggcggtgggatgcgactccg
actcctgggagattgggcgatgcaacaccgtctgcgtctgttggaaggaggaatcgctgg
gacgagacgccaacgcctgggagattggcagatgccaccccggccggtggggctactcct
ggagccaccccggctgggatgacgtgggatgcaacgccaaagctttcaggcctcgccact
cccactccgaagcggcagaggtcaaggtgggacgagacgcccgccaccatgggcagcgcg
accccaatggcgggggcaacgccttctgctgctgccgcggcgttcacacctgggattact
cccgtgggcggagtcgatcttgcgaccccaacgccgggggcaatcaatctgcgtggctcc
atcaccccggagcagtacaatttgctgaggtgggagaaggatatcgaggagaggaaccgg
cctttgaccgatgaggaactggactccatgtttccgcaagagggttataagattttggag
cctccagcatcctatgtgcctattaggacgccggcgaggaagctgcttgcgacgcccact
ccgctggggacgccgctgtattcaattcccgaagagaatcgcggccagcagtttgacgtg
cccaaagaagcgcctggtggcttgccgtttatgaagcccgaggactaccagtactttggt
gcgttgttgaatgaggaggatgaggaggagttgtctcctgaagagcagaaagagcggaag
atcatgaagctcttgcttaaggtcaagaatggaacaccaccgcagaggaaaacggcgctg
cggcagcttactgataaggcgagagagttcggggccggccccttgtttaaccggattctg
ccgttgcttatgcaacccactttggaggaccaagagaggcatctcttggtgaaggtaatt
gatagggttctttataagttggatgagttggtacgcccttatgtgcataagattcttgtt
gtgattgagcccctgctgattgatgaggattactatgcgcgtgttgaagggcgagagatt
atttccaatcttagtaaggctgctggcttggccaccatgattgctgctatgcgacctgat
attgacaacattgatgaatatgtcaggaacacgaccgccagagctttcagtgttgttgct
tctgctcttgggattcctgctctcttgcccttcttgaaggccgtgtgtcagagtaagaaa
tcatggcaagctcggcacactgggattaagattgttcagcagattgctatcttgatcggt
tgtgctgtgcttcctcatctgaggtctcttgtggagatcatagaacatggtctgctggat
gagaatcagaaggtgaggacaatcaccgcattgtctctggctgctcttgctgaggctgct
gccccctatggtattgagagctttgactcagtgttgaagcctttgtggaagggtatcagg
tcacaccgtgggaaagtcttggctgcgttcttgaaggctatcggctttatcatcccgctt
atggatgcgctatatgctagttactatactaaggaagttatggttattttgattcgagag
tttcagtcacccgatgaggagatgaagaagattgttctgaaggttgtgaagcaatgtgtg
agtacggagggtgtggacgctgaatacattcgcaatgatgttcttcctgagttctttaga
aacttctgggtcaggaggatggctttggataggagaaactataggcaacttgtggagaca
acagtggagatggcaaacaaagttggtgttgccgatatagtagggagaattgttgaggat
cttaaagatgagagtgagccttacaggcgaatggttatggaaaccattgagaaggtggtt
gccaacttgggtgcatctgatattgatgctcggttggaagagcttcttattgatggaatc
ctttatgctttccaagagcagaccagtgatgatgccaatgtaatgcttaacgggtttggt
gcggttgtgaactcacttgggcagagagtgaaaccgtacctaccccagatctgtggtacc
ataaaatggcgattgaataacaagagcgcaaaggtgagacaacaagcagctgatctcatt
tcaaggattgctgttgtcatgaagcagtgccaggaggaacaactgatgggtcaccttggt
gttgtcttgtacgagtatctgggagaagagtatccggaggttttgggatcaattctggga
gctcttaaggcaattgtcaatgttattggtatgacaaagatgactcctcctataaaggat
ttgcttcctaggttgacaccaattctgaagaataggcatgagaaagtccaggagaattgc
attgaccttgttggacgaattgctgaccgtggggctgagtttgttccggcaagggagtgg
atgaggatttgctttgagcttcttgagatgcttaaagcccacaagaagggtattcggaga
gctacggtgaacacctttgggtatattgccaaagccattggaccgcaagacgtcctggct
accttgttgaataatctcaaggtgcaggagcggcagaaccgtgtctgcacaactgtcgcc
attgctatagttgcagaaacctgttccccctttacagttctgccagctttgatgaatgag
tatcgtgtgccagaacttaatgtgcagaacggtgtcttgaaatccctctcttttctgttc
gagtatatcggtgaaatgggaaaagactacatctatgccgtgaccccattgcttgaggat
gccctcatggatagggatttggttcacaggcagactgcggcttctgctgttaagcacatg
gccttgggggttgctggtttgggttgtgaagacgctttaatccacttgctcaactatgtg
tggccaaacatttttgagacttccccgcatgtgataaatgctgtcatggaagcaattgaa
ggaatgagggtggccttaggtgctgctattgtgctaaactactgtcttcaggggctcttc
catcctgctcgtaaggttagggaggtctactggaagatttataactcgctgtatattgga
gcacaagatgctcttgtggcggcatatcctgtgctggaagacgagcatagcaatgtatac
agcaggcctgagttaatgatgtttgtctga

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