Corylus avellana (European hazelnut): 132184574
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Entry
132184574 CDS
T09426
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A-like isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132184574
Membrane trafficking [BR:
cave04131
]
Protein recycling
Others
EARP complex
132184574
Endosome - Golgi transport
Tethering complex
GARP complex
132184574
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
COG7
COG4_N
Vps54_N
Motif
Other DBs
NCBI-GeneID:
132184574
NCBI-ProteinID:
XP_059454239
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Position
ca6:4704204..4718644
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AA seq
592 aa
AA seq
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MDKSSALEYINQMFPTEASLYGVEPLMQKIHSEIRRVDAGILAAVRQQSNSGTKAKEDLA
AATCAVEELMYKIREIKGKAEQSEMMVQEICRDIKKLDFAKKHITTTITALHRLTMVVSA
VEQLQIMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKNIKQILKSHVFSD
FSSLGTGKETEETNLLQHLSDACLVVDALEPSVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRIRTNEEIWKIFPPSWHVPYRLCIQFCKKTRKQLEEILDNLKEKPDV
GALLLALQRTLEFEDELAEKFGGGARSLETGNEIEEIGRGKNTSQSVLDIRKKYERKFAA
HQGTGIEENDGKKELSVPGAGFNFRGIISSCFEPHLTVYVELEEKTLMENLEKLVQEETW
DIEEGSQNNVLSSSMQLFLIIKRSLKRCSALTKNQTLFNLFKVFQRILKAYATKLFVRLP
RGGTGIVAAATGMDGQIKTSDRDERVMCYIVNSAEYCHKTHRHSNRWGHETYVVQAGGQP
ISIHDALGQINWFTETAIKIRVVMFFGTLTGCSLLAKALNRVVKFLAATLSL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtcgagcgctttggagtatatcaaccagatgttccctacagaggcatcttta
tatggtgtcgagccactcatgcaaaagatacacagtgagattcgtcgtgtagatgctgga
atattagcagctgttcgtcaacagagtaattcaggaaccaaagccaaggaggatcttgca
gctgctacgtgtgctgtggaggaactcatgtataagatccgagaaataaaaggcaaagct
gagcaaagtgagatgatggttcaggaaatatgccgcgacattaaaaagttggactttgca
aaaaagcacataacgactacaattacagctcttcatcgtcttaccatggtagtctctgct
gttgagcagcttcaaattatggcttcaaaacgacaatataaggaggcagctgcacagcta
gaggctgtgaaccaattatgtagtcactttgaagcctatagggatattccaaagatcaca
gaactcagggagaagtttaagaatatcaaacaaattctcaagtcgcatgtgttttctgat
ttctccagcttaggtactggaaaagagacagaagaaactaatttactacagcatttatct
gatgcctgcttggttgttgatgctttggagccatctgtgagggaagagttggtaaacaat
ttttgcagccgtgagcttacttcgtatgaacaaatttttgaaggagctgaactggctaag
ttggataaaactgaaaggagatatgcatggatcaagcgtcgaataagaacaaatgaagaa
atctggaagatctttcctccttcatggcatgttccttatcgcctctgcatccagttctgt
aagaaaacgaggaaacagcttgaggaaatcctggataatctgaaagaaaaaccagatgtt
ggggctttattgttggcactacaacgaactctagaatttgaggatgaattggctgagaaa
ttcggcggaggtgcacgaagcttggagacaggtaacgagattgaggaaataggcaggggc
aaaaatactagtcaaagtgttttagatattcgaaagaagtatgaaaggaagtttgctgca
catcaaggaactggaattgaagaaaatgatggaaagaaagagttgtcagtgcctggagct
gggttcaacttccgtggaatcatatcatcttgctttgaacctcacttgaccgtgtatgta
gaactggaagagaagacattgatggagaatctggagaaacttgttcaggaggagacgtgg
gatatagaggagggaagtcagaataatgttttatcaagtagcatgcagttgtttcttata
atcaagaggagcttaaagagatgcagtgctctaacaaagaaccagacgctatttaatttg
ttcaaggtgtttcaaagaattcttaaagcatatgcaacaaaactttttgtaagactacct
aggggtggaacaggaatagttgcagcagccacgggcatggatggacagataaagacttct
gacagggatgaaagggtgatgtgttatattgtgaattcagctgaatattgtcataaaacg
cacaggcacagcaatagatggggtcacgaaacttatgttgttcaagctggcggacaaccg
atttccatacatgacgcattagggcagatcaactggtttacagagacagcgataaagatt
cgtgtggtgatgttttttgggacattgaccgggtgttctttacttgccaaggccctcaac
cgggtcgtgaagtttctggcagcgactctgtcgttataa
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