Corylus avellana (European hazelnut): 132184859
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Entry
132184859 CDS
T09426
Name
(RefSeq) F-box protein SKP2B-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132184859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cave04121
]
132184859
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132184859
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
LRR_8
LRR_At1g61320_AtMIF1
F-box_4
Motif
Other DBs
NCBI-GeneID:
132184859
NCBI-ProteinID:
XP_059454622
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Position
ca6:2704907..2709618
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AA seq
373 aa
AA seq
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MVGKDNLKTEDLNLCFEKLMMFGGSGIGKGGAKMEGGVITEWKDIPMELLLQIVSLVDDQ
TVIVVSGVCRGWRDAICLGLTHLSLSWCNKNMNDLVLSLAPKFTKLQSLTLRQDKPQLED
NAVEAIANCCHDLQVLDLSKSFKLSDRSLHALAHGCPNITKLNISGCSAFNDHALAYLAG
FCRKLKVLNLCGCVKAASDIALQAIGRHCNQLQWLNLGWCENVSDVGVMSLAYGCPDLRT
LDLCGCVLITDDSVIALANECIHLRSLGLYYCQNITDRAMYSLAHSRVKNKTSIWESMKG
MNDEEGLKTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCACAFH
AHRTASTFPHPAH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtaaagacaacttgaagacggaggacttgaacttgtgctttgagaagcttatg
atgtttggtggaagtgggattggaaaagggggagcgaaaatggaaggtggtgtcatcact
gagtggaaggatattcctatggagctcttgttgcaaatcgtttcgcttgttgacgatcag
acggtgatcgtggtgtctggagtgtgtcgtgggtggagagatgctatttgcttgggcctt
acccatctctctctctcatggtgcaacaagaacatgaacgacttggtcctatctcttgct
ccaaagttcacgaaattgcagagtctgacactgcgccaagataaaccacagcttgaggat
aatgctgttgaagctattgcaaactgctgtcatgatctgcaggtcctggacctcagcaaa
agcttcaagcttagtgaccgttccctacatgccctggctcatggttgtcctaatattacg
aaactcaacatcagtgggtgttcagccttcaatgaccatgctcttgcatatctggctggt
ttttgcagaaagttaaaagttttaaatctttgtggatgtgtcaaagctgcttctgacatt
gcattgcaggctatcggacgccactgcaaccagttgcagtggttaaatcttggatggtgt
gagaatgtaagtgacgtgggagtgatgagtttggcgtatggatgccccgatctcagaacc
cttgatttgtgtggctgtgtccttataactgatgatagtgtcattgctcttgcaaacgaa
tgtattcatctgagatcccttggcctgtactactgtcagaacatcacggacagagcaatg
tactctttggcccacagcagagtgaagaacaagacttcaatttgggaatcgatgaaagga
atgaatgatgaggaagggcttaagactctcaacatcagccagtgcacagcactcaccccc
cctgctgttcaagcagtgtgcgattcatttcctgctctccacacttgctcaggaaggcat
tcacttatcatgagcggctgcttgaacttaatgtctgtgcattgtgcctgtgctttccat
gcacaccgcacagccagcacttttcctcacccagctcattga
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