Corylus avellana (European hazelnut): 132184874
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Entry
132184874 CDS
T09426
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132184874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132184874
Enzymes [BR:
cave01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
132184874
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132184874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
132184874
NCBI-ProteinID:
XP_059454640
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All DBs
Position
ca6:complement(1121272..1124061)
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AA seq
411 aa
AA seq
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MIQARATSTILPIEAFVSPSFTQRTGGSCRGEKNLRFVATICMHSLRSSSLSIMKRPRPT
PPPTPPLSTTKITRPFSKKPKPATPPKWVSLGLTQSELSLPLTFPTGQTFRWRQTGPLQY
TGVVHSHLVSLKHLQNGDVSYCLHHTTTSEAKARLALLDFLNAGISLSDVWAVFSASAPR
FAELASHLGGARVLRQDPLECLVQFLCSSNNNIARITKMVDFVSSLGDYLGTVEGFEFHQ
FPSLERLKMVSEDELRAAGFGYRAKYLIGTVNALQSKPGGGAEWLASLRNFDLQEVIDAL
STLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATRYLLPELAGARLTPKLCSRVAEAF
VSKYGKYAGWAQTLLFIAELPSQKALLPSHFCSIKEKKSAESKNGKMCSGN
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgatccaagcccgcgcaacgtcaacgatcctcccaattgaggcattcgtctccccttct
ttcacacagcggaccggagggagctgcagaggcgagaaaaacctccgattcgtggccacc
atttgcatgcactcattgagatcgagctccctctcaatcatgaagcggccaagacccacc
ccaccaccaacaccaccgctctccaccaccaaaatcaccagacctttctccaaaaaaccc
aaacccgcgaccccacccaagtgggtttccctcggcctcactcaatcggagctctccctg
cccctcactttccccactggccaaaccttccggtggagacagactggccctctccagtac
acgggcgttgtccactctcaccttgtctctctcaagcaccttcagaacggcgacgtatcc
tactgcctccaccacaccaccacctccgaggccaaggccaggcttgcactgctcgatttt
ctcaacgcgggcatttctctcagtgacgtctgggcggtcttctcggcctcggccccccgg
ttcgccgagctggcaagccacttgggcggggcccgggtgctcaggcaggacccgctcgag
tgtttggttcagtttctgtgttcgtctaataacaacattgcgaggatcaccaaaatggtg
gactttgtttcgtcgcttggggattatttggggactgtggagggctttgagttccaccag
ttcccgagtttggagcggctgaagatggtctcagaggacgagcttagagcggccggtttc
ggttacagggctaaatacctcattggtactgtaaatgctttgcaatcaaaacctggtgga
ggtgcggaatggcttgcttctcttcgtaatttcgatcttcaagaggttattgatgctctc
tctactctacctggagttggtcccaaggtggcagcgtgcatagctctcttctctcttgat
caacaccacgccattcctgtcgatacacatgtctggcagattgctacaagatacctatta
ccggaacttgcaggtgcccgtctgacacctaagctatgcagtcgtgtggcagaggcattt
gtgagcaaatatggaaaatatgctggctgggctcaaactctgctcttcattgctgaatta
ccttcacaaaaggccctcctaccatcacatttttgtagtatcaaagaaaagaaatctgca
gagagtaagaatggcaaaatgtgcagtggtaattga
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