Corylus avellana (European hazelnut): 132184935
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Entry
132184935 CDS
T09426
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
132184935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cave03011
]
132184935
Ribosome [BR:
cave03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
132184935
Bacteria
132184935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
RRP4_S1
Caps_syn_GfcC_C
Motif
Other DBs
NCBI-GeneID:
132184935
NCBI-ProteinID:
XP_059454710
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All DBs
Position
ca6:3980980..3986762
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AA seq
530 aa
AA seq
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MPILLQPCKSLCSPNYVLPVKNFTVVSNTVQSNAFSSDPKCTASKPSKCKLFSTVGSLQN
LIFSKNFSIWGGTHVSFCSGNEVFDGFSFTQLPQKPESKATKENEELELLNKPSPVPINN
GVDSELDKESEKPDKDEALAPFLKFFKGRDSGEDVKEEGVVLEEKSDVDDRSEEVKKVGI
EYYEPKPGDFVVGVVVSGNENKLDVNVGADLLGTMLTKEVLPLYDKEMEYLLCDTDKDAN
EFMVRGKMGIVKNDGALSGGPVPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRFFRRIAW
HRVRQIKQLNEPIEVKITEWNTGGLLTRIEGLRAFLPKAELSNRVYNFTDLKENVGRRIH
VKITRIDETKNDLILSEREAWEMLYLREGTLLEGTVKKIFPYGAQIRIGETNRSGLLHVS
NITRSRITSVSDLLAVDEKVKVLVAKSMFPDKISLSIADLESEPGLFISNKEKVFAEAEV
MAKKYREKLPAGLFSHKLAYLPTNALPFDNEASMYANWKWFKFESEHKPV
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgccaattcttcttcaaccctgtaagtctctctgctcccccaactatgttttaccagtt
aagaatttcactgttgtatccaacactgtccaaagcaacgcattttcgagcgaccccaaa
tgcacagcttcaaaaccctccaaatgcaaactattttccactgttgggtctcttcaaaat
ctgatattttctaagaatttctccatttggggaggtacccatgtttccttttgctctgga
aatgaggtttttgatggtttctcgtttacccagttgccccaaaagcctgaaagtaaagct
actaaagagaatgaagaacttgaattgctaaataagccttccccagtgcctataaataat
ggggttgactcagaattagacaaggaatctgaaaaacctgataaagacgaggctttggcg
ccttttttgaagttcttcaaggggagagattctggggaggacgtgaaagaagagggagtt
gtattagaggaaaaaagtgatgtggacgacaggagtgaggaagttaagaaggtcggtatt
gagtactacgagcctaaacccggtgattttgtggtgggagtggtggtttcaggtaacgag
aataagcttgacgtgaatgtaggggcggatttgttgggtacaatgttgacaaaggaggtg
cttcccctgtatgacaaggagatggaatacttattgtgtgataccgataaggatgccaac
gagttcatggtccgggggaagatgggaattgtgaagaatgatggcgccttaagtggggga
ccggtgcctggaaggcctgttgtggagactggaactgttttgttcgctgaggttcttggg
agaacacttagtggtcgaccattgctttcaactagacggttcttccggcggattgcttgg
catcgagtgaggcagataaaacaactcaatgaacctatcgaggtgaaaataacagagtgg
aataccggaggtcttcttacaagaattgagggtttgcgagcttttcttccaaaagctgag
ttatcgaatagggtgtacaacttcactgatttgaaagaaaatgttggacgccggatacat
gtgaagattactcgcatagatgagactaaaaatgacttaatattgagtgagcgggaagct
tgggaaatgttataccttagagagggaacacttttagaggggactgttaaaaagatcttc
ccatatggagctcagataaggataggcgaaactaacagaagtgggttgctgcatgtctca
aacatcacccgctcccgaattacttcagtcagtgacttacttgcagttgatgagaaggtc
aaagttctggttgcgaagtcaatgtttcctgataaaatatctctgagtattgctgacctt
gaaagtgagcccggcctatttatatcaaacaaagagaaagtatttgccgaggctgaagtg
atggcaaagaagtacagggaaaagctacctgctggtttattctctcacaagttggcatac
cttccaaccaatgctttaccttttgacaatgaagcaagtatgtatgcaaattggaaatgg
ttcaagtttgaaagtgaacataaaccagtgtga
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