Corylus avellana (European hazelnut): 132184956
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Entry
132184956 CDS
T09426
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03030
DNA replication
cave03410
Base excision repair
cave03420
Nucleotide excision repair
cave03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132184956
03410 Base excision repair
132184956
03420 Nucleotide excision repair
132184956
03430 Mismatch repair
132184956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cave03032
]
132184956
03036 Chromosome and associated proteins [BR:
cave03036
]
132184956
03400 DNA repair and recombination proteins [BR:
cave03400
]
132184956
DNA replication proteins [BR:
cave03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
132184956
DNA Replication Termination Factors
ELG1-RFC complex
132184956
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
132184956
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
132184956
Check point factors
HRAD17(Rad24)-RFC complex
132184956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_assoc_2
AAA_22
AAA_16
AAA_11
AAA_5
DUF815
AAA_14
DNAX_ATPase_lid
AAA_24
ATPase_2
AAA_30
RuvB_N
AAA_3
AAA_7
AAA_19
nSTAND3
bpMoxR
ResIII
TniB
SLFN-g3_helicase
AAA_18
MCM
AAA_25
NB-ARC
TIP49
Mg_chelatase
AAA_28
AAA_2
Motif
Other DBs
NCBI-GeneID:
132184956
NCBI-ProteinID:
XP_059454737
LinkDB
All DBs
Position
ca6:1059178..1064253
Genome browser
AA seq
364 aa
AA seq
DB search
MTEVVSLMDIDDDDHKNDNNHSLKPNNGKGKNVVVVEGQAIPWVEKYRPQSLADVAAHRD
IVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGVQYHNMILELNASDARGIDV
VRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTRNTRFTLICNH
VNKIISALQSRCTRFRFAPLDSFHVTERLRHVIEAEKLEVSETGLVALVRLSNGDMRKAL
NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNDSFAESFKRISEMKTRKGLAL
VDIVREVTMFVFKIKMPSDVRVQLINDLADIEYGLSLGCNDKLQLGSLIASFTRARSALV
AAAT
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggttgtatctctcatggacatcgacgacgacgatcacaaaaacgacaacaac
cactctctcaagcccaacaacggcaagggaaagaacgtcgtcgtcgtggagggtcaagcc
atcccttgggtcgagaagtaccgtcctcagtccctcgccgacgtggccgctcaccgtgac
attgtcgataccattgataggctgacgagcgagaacagattgccccatctcctattgtat
ggcccgcctggcacgggcaaaacatcgactattcttgctgtggcgcgcaagctttatgga
gtgcaataccacaatatgattctggagctgaatgcgtcagatgctaggggaattgatgtt
gtgcgacaacagatacaagattttgccagcactcagagcttctcttttggtgtaaaggcg
tctgtaaagttggtcttattggatgaggctgatgctatgacaaaggatgcacagtttgcc
ttgcgcagagtgattgagaaatacacaagaaacactaggttcacacttatttgtaatcat
gtcaacaagattatttcggcactacagtcaagatgtacccggtttcgttttgctcctctt
gattcttttcatgtcactgagcgactcagacatgttatagaagctgaaaagcttgaagta
tccgaaactggcttagtggcactcgtacgacttagcaatggtgatatgagaaaggctttg
aacattttgcagtcaacgcatatggcttctcagcagataacagaagaagctgtttacctg
tgcactggaaatccattacccaaagacattgagcagatatcatactggcttttgaatgat
tcatttgcagagagctttaaacgaatatctgaaatgaagacgaggaaaggattggccttg
gtagatattgtgagagaggtgacaatgtttgttttcaagatcaagatgccatcagatgtt
cgagttcagttaattaatgatttggctgacatagagtacgggttgagtctcgggtgcaac
gataaattgcaactgggatcgcttattgcttcttttacacgagctcgctctgctttggtt
gccgctgcaacgtaa
DBGET
integrated database retrieval system
