Corylus avellana (European hazelnut): 132185411
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Entry
132185411 CDS
T09426
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cave03000
]
132185411
04121 Ubiquitin system [BR:
cave04121
]
132185411
Transcription factors [BR:
cave03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
132185411
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
132185411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K_trans
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
132185411
NCBI-ProteinID:
XP_059455172
LinkDB
All DBs
Position
ca6:23822411..23835564
Genome browser
AA seq
1933 aa
AA seq
DB search
MSYQARNDRRDRTRFPAQGARHQWVPRGSTATTEVNLNLNPNPNPTQNPNPQLSFNANRG
TVEDSNYGSAPPESRPRRNNGPRAYVSRSVNQKRDGETEKEKEKERERENQEEKGLKDSK
VPQLVQEIQEKLIKSTVECMICYDMVRRSAPIWSCSSCYSIFHLTCIKKWARAPTSVDLL
AEKSQGFNWRCPGCQSVQLTLLKEIRYVCFCGKRPDPPSDLYLTPHSCGEPCGKPLEREV
LCPGESGEDLCPHVCVLQCHPGPCPPCKAFAPPHLCPCGKKTITTRCSDRKSLLTCGQRC
DKLLDCMRHRCERTCHVGPCDPCKVLVNAPCFCKNKVEVVLCGDMAVKGMVKTEDGVFSC
GSSCGKKLLCGNHVCSDICHPGSCGECDLMPSRVKTCYCGKTSLQQERLSCLDPIPTCSE
KCGKSLPCGMHHCTEVCHAGDCPPCLLKVSQKCRCGSTSRTVECYKTTMEEKFTCDKPCG
RKKNCGRHRCSERCCPHSNSNNLLVGDWDPHFCSMPCEKKLRCGQHSCESLCHSGHCPPC
LETIFTDLTCACGRTSIPPPLPCGTPTPSCQLPCSVPQPCGHSSSHSCHFGDCPPCSVPI
AKECIGGHVVLRNIPCGSKDIRCNKLCGKTRQCGMHACGRTCHPQPCDSSPGPLPGLRTS
CGQTCGAPRRDCRHTCKAPCHPSAPCPDVRCDFPVTITCSCARLTATVPCDAGGSNGGFS
ADTLYEASIIQKLPVPLQPVEATGKKIPLGQRKLMCDDDCAKLERKRVLADAFDITPPNL
EALHFGENSVVSEVLADLYRRDPKWVLSVEERCKFLVLGKSRGTTSGLKVHVFCPMLKDK
RDAVKLIAERWKLAVYSAGWEPKRFIVVHVTPKSKVPSRVIGVKVSTTVNSSHPPAFDPL
VDMDPRLVVSFLDLPRDADISALVLRFGGECELVWLNDKNALAVFSDPARAATAMRRLDH
GSVYHGAVVVLPNGGAVAASSATSAWGGAVTALKGNPWKKAIVQEAGWKEGLWSDEEWPG
GSADMQASVWKKEAPIAASLNRWSVLDSETSLSSSAASLRAEDPGKGAGSSSGSVLQSDE
GGSNSAGQHQGGNFSGTEMPEVVDDWEKAYEGNRCTSFYHYLPKTFLIPINLSVFLPTHH
MAPPLSPCISSHEFTKVPWKHTLLFSFQSLGVIYGQISTAPLYVFGTIAAKDINSQEAVY
ELFSFIFWTMTTISLLKYCFIVLKADDDGEGGIFALYSLLCRHAKVGLLPIDRNGYGVMH
YEEETPSKIKVESRAWRAIAKHKSSHYLMLCLALFGSCMTIGEGVLTPALSVLSASKGVQ
RSLSGMAHKFFSSQSTQQSVSKALERYVPVPSACAILVCLFMLQHYGTHKIGFMFAPIII
IWLLFVSGVGIYNIFHWNKQIIHAISPIYMYRFVRNIDIHSWRSLGSIILCLAGSETMFA
DLGHFSRKPIKIAFLCLIYPVLTICYAGQAAYISKNLSVQDFNHLTESVPGPTRHFFIVL
SLLASAVGSQATITASFSVINQCLTLDCFPRVKVIHTSDKIHGQVYIPVVNWLLMIFSLT
VTIGFRDIVKIGNATGLAVISGMLVTTCLMSLVIALYWEKSWFLSACFFMFFGFIETTYL
SACMLNFHKGAWYLVVLLALSLNVMLGWHYGTMKKYEYDLQNKVPTAWLTEHSSDLGVSR
IPGIGLIYTDMVTGIPAFFSHFITNLPAFHQVLIFVSFMSLPVPYVPPSRRYLIGRVGPK
DYKIYRCIVRHGYCDHIRDTNDFEEEIIRSIGEFVSVEENDLESLTSPEGRMIVVGKPLP
DGNGLVPLNETSSDFGSAGLANHESQRSPVGDALESSHAGVKIRKKVRFMLPPNSPKMRT
SVREELQEIIDARESGTAYFVGQSHLQVRDGSNFVKRFLIKTYIFCDKNCREPPVALNIP
HAALVEVGMLCTI
NT seq
5802 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagctcgaaatgatcgaagggataggactagatttcctgcccaaggcgct
cgccatcagtgggttccgagaggatccactgccaccaccgaagtgaacctgaacctgaac
ccgaaccccaatccaacccaaaacccaaacccacaattgagcttcaatgcaaaccgcggg
actgttgaggactcaaattatggttctgctccgcctgagagtcggcctagaaggaataat
ggtccgagggcttacgtgagtcgatctgtgaatcagaagagggatggggagacagagaaa
gagaaggagaaggagagggaaagggagaatcaggaggaaaagggattgaaggactccaag
gtacctcagcttgtgcaagaaattcaggagaagctgattaagagcaccgttgaatgcatg
atttgttatgatatggtgcggaggtcagcacccatatggtcttgctcgagctgctactct
atttttcatctgacttgtatcaagaaatgggctagggcgcctacttctgttgacttgttg
gcggagaagagtcagggatttaattggaggtgtcctggatgtcagtcggtgcagcttacg
ttgttgaaggagattcggtatgtttgcttttgtgggaagaggccagacccaccttctgat
ctgtatttgactcctcattcatgtggagaaccttgtgggaagccacttgaaagggaggtt
ttgtgtcctggagagagtggggaggatctttgcccacatgtttgtgttttgcaatgccac
ccaggtccatgccctccttgtaaggcatttgccccgccacatttgtgcccgtgtgggaag
aaaacaattacaacacggtgctctgatcggaagtctcttcttacttgtggtcagcgctgt
gacaagcttcttgattgcatgcgtcacaggtgtgaacgaacctgccatgtgggtccttgt
gatccttgtaaggttctagtcaatgctccttgtttctgcaagaataaggtggaggttgtt
ctttgtggagacatggctgtgaagggaatggtgaaaacagaggatggtgttttttcttgt
ggttcaagttgcggaaagaagcttctatgtggtaatcatgtctgcagtgacatttgccat
ccaggctcttgtggagagtgtgacttaatgccaagcagggttaagacatgctactgtggg
aaaacaagcttgcagcaggaacggcttagctgtttggacccgattccaacctgttctgaa
aaatgtggcaagtcccttccttgtgggatgcaccattgtacagaggtgtgccatgctggg
gattgtccaccatgtttgcttaaagtttctcaaaaatgccgttgcggatcaacctctcga
actgtagaatgctacaaaacaacaatggaggagaaatttacttgtgataagccttgtggg
cggaagaagaattgtggaaggcacaggtgcagtgagcgatgctgcccgcactctaattca
aacaatcttctcgttggggattgggatccacacttctgctcgatgccatgtgagaagaag
ctgaggtgtgggcagcattcttgtgaatcactgtgtcatagtggccattgccctccttgc
ctagaaacaatttttactgatttgacgtgtgcatgtgggagaacttcaatccctcctccg
ttgccttgcggcacacctactccttcatgtcagctcccatgttcagttcctcagccttgt
ggccattcatcttctcacagctgccactttggggactgcccgccatgttctgtgcctata
gcgaaggaatgcattggcgggcatgttgtccttaggaacataccttgtggctcaaaggat
atcagatgtaacaagctttgtgggaagaccaggcagtgtggaatgcatgcttgtggcaga
acttgtcacccacagccttgtgattcttcacctgggcctctaccagggttgagaacttcg
tgtgggcagacatgtggtgctcctaggagagattgtaggcatacgtgtaaagcaccttgt
cacccttctgctccttgtcctgatgtaagatgcgatttccctgtaacaatcacttgttct
tgtgcccggttaacagcaactgttccatgtgatgctggaggcagcaacgggggtttcagt
gctgatactttatatgaagcttctattatccaaaagttgccagtgccgcttcaaccagtg
gaagcaactggaaagaaaattccactcggacagaggaagctcatgtgtgatgatgactgt
gccaagttggaacgaaaacgggttctagcagatgcttttgatattactcctccaaacttg
gaagctcttcattttggtgagaattctgttgtttctgaagtacttgcagatctctataga
cgtgatccaaagtgggtattgtctgtggaggagagatgcaagttcttggtacttggcaag
agcagaggaactacaagtggtcttaaggttcatgttttctgtccgatgctgaaggataag
agagatgcagtaaaactgattgccgagagatggaagcttgctgtttattctgctggttgg
gagccaaagcgttttattgtggttcatgttacacccaaatcgaaagtcccttctcgtgtg
attggggtcaaggtttccaccactgtaaactcatcccatcctccagcttttgatcctttg
gttgacatggatcctagacttgttgtttcttttctcgatttgccaagagatgcagatata
agtgcattggtcttgaggtttggtggggaatgtgaactagtttggctgaatgacaagaat
gcattggctgtatttagtgatcctgcccgagcagccactgcaatgaggagattggatcat
gggtcagtatatcatggagctgttgtggttctcccaaatggtggtgcagtagcagcatca
tcggctactagtgcctgggggggagcagttactgctctcaagggtaacccatggaagaaa
gctattgttcaggaggctggttggaaggaaggtctatggagtgatgaagagtggcctggt
ggttctgcagatatgcaggcatctgtgtggaaaaaagaagcgccaattgctgcatcatta
aatcggtggagtgtcctagactctgaaacatctttgagttcatctgctgcatctctcaga
gccgaggatcctggaaaaggggcaggaagtagttcaggttcagtcttgcaatccgatgaa
ggtggttcgaattcagcagggcagcatcaaggaggtaattttagtggaacagaaatgcct
gaggtggttgatgactgggagaaggcttacgagggcaaccgctgcacttcattttatcat
tatcttcccaaaactttcctcattcccatcaacttgtcagtctttctaccaacacatcac
atggctcctccactgagtccttgtatctcctctcatgagtttacgaaggtgccatggaag
cacacactccttttctcatttcaaagccttggagtaatttatggtcaaataagtactgct
cccttatatgtctttgggacgattgctgcaaaggatatcaactcacaagaggctgtgtat
gagctcttttcatttattttctggaccatgaccaccatttcattactgaagtattgcttt
atagtactgaaggctgatgatgatggagagggtggtatttttgctttgtactcactatta
tgcaggcatgccaaagtaggtctgcttccaattgacagaaatggctatggggtcatgcat
tatgaggaggaaactccttcaaagatcaaggtggaatcgagggcttggagggccattgca
aaacataaaagtagtcactacttgatgttgtgcttggctctgtttggttcctgcatgaca
attggagagggggtgcttactccagccctttctgtgttatcagcttcaaaaggtgttcaa
agatcattgtcgggtatggcacataaatttttttcttcacaaagtacacaacagtccgtc
tcaaaagctttagaaagatatgtaccagttccctctgcatgtgctatactggtatgcctc
ttcatgctgcagcactatgggactcataaaatagggtttatgtttgctccaattatcatt
atttggctgttatttgtcagtggtgtgggcatatataatatctttcactggaacaaacaa
atcatccatgcaatctccccaatatacatgtatagatttgtcagaaatattgacattcac
agttggagatcattaggcagcatcattctatgtctagcaggatcagagaccatgtttgca
gatctaggccatttctcgaggaaacccatcaagattgcatttctctgcttgatttatcca
gttcttactatatgctatgcgggtcaggctgcatatatatccaaaaacttatctgttcaa
gattttaatcatctaacagaatctgtacctggtcctactcggcatttcttcattgtatta
tccctacttgcctcagctgtaggaagccaagcaaccataacagccagtttctctgtcata
aaccagtgcctgacacttgattgttttcccagagtgaaagttattcatacatcagataag
atacatgggcaagtctacattccagttgtcaactggctattgatgatcttcagcctcaca
gtcacaataggtttccgtgatattgtgaagattggtaatgcaacaggtttggctgtaatt
tctggaatgcttgtgacaacttgtctgatgtcccttgtaattgctctgtactgggagaag
agttggtttttatctgcttgcttttttatgttctttggcttcattgagaccacctatctg
tcagcttgtatgttgaactttcacaagggagcttggtatcttgttgtccttttggcattg
tccttgaacgtcatgcttggatggcattatggaaccatgaagaagtatgagtatgattta
cagaacaaggtgcccacagcatggctgacagaacatagctcagaccttggagtttccagg
atacctggaatcggcttaatttacaccgatatggtgaccggaatcccggctttcttctcg
catttcattacgaatcttcctgcatttcatcaggtgcttatttttgtttccttcatgtct
ctacctgtgccttatgttcccccaagtagaaggtatcttataggaagggtagggcctaaa
gactacaaaatatatcgttgcattgtgagacatggctactgtgatcacattagagacaca
aatgactttgaggaagagattattcgttcgatcggagaattcgtttcggtggaagaaaat
gacttggaatccctgacatccccagaagggagaatgattgttgttggaaaaccattgcca
gatggaaatggtttggttccattgaatgaaaccagctcagattttggttctgcaggcttg
gcaaaccatgaatctcagagaagtcctgtgggtgatgcacttgagagcagccatgctggt
gtgaagatcaggaaaaaggttagattcatgttgcctccaaatagtccaaaaatgagaaca
tctgtgagggaggagctacaagaaatcattgatgccagggagagtggaactgcatatttt
gtagggcaatcacatttacaagtgcgtgatggctcaaactttgtgaaacggttcctgatc
aagacctatattttttgtgataaaaactgcagagagcctccagtggccctcaacatccct
catgctgctcttgtggaggttggcatgctatgtaccatatga
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