Corylus avellana (European hazelnut): 132185988
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Entry
132185988 CDS
T09426
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03082
ATP-dependent chromatin remodeling
cave03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132185988
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132185988
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cave01009
]
132185988
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132185988
03036 Chromosome and associated proteins [BR:
cave03036
]
132185988
Protein phosphatases and associated proteins [BR:
cave01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132185988
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132185988
SWI/SNF complex
132185988
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132185988
PBAF complex
132185988
SWI/SNF complex
132185988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
132185988
NCBI-ProteinID:
XP_059455781
LinkDB
All DBs
Position
ca1:8427392..8430773
Genome browser
AA seq
240 aa
AA seq
DB search
MKAPASTSYKAPVRFRMPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVAVFAKRTV
KDLKLPPAFITQIASSIQSQLAEFRSLEGQDMYTGEKIVPIKLDLRVNHTLIKDQFLWDL
NNFESDPEEFARTFCRDQGIEDPEVGPAIAFAIREQLFEIAIQSVASARESRISKKGRRG
AEHAPASKAGGAVLDLMKLFGHKSTVVRKRKEWDVYEPIVDLLSNEEVDALEAREERNFW
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctccggcgtcaacttcctataaggctcccgtcaggttcaggatgccgactgca
gagaatttggtgccaattcgtctggacatcgaaatcgacggccagaggttcaaagatgct
tttacttggaacccttctgatcccgattcagaggtggcggtgtttgcgaaaaggacagtg
aaagatttgaagctccctccagcattcataacgcagattgcttcatccattcaatcgcag
ctagcagaatttcgatcacttgaagggcaggatatgtacactggggagaagattgttcca
attaagcttgatcttcgagtaaatcatacacttataaaggaccagtttttgtgggacttg
aacaattttgagagtgaccctgaagagtttgctagaactttctgcagagatcagggcatt
gaagaccctgaagttggacctgcaattgccttcgcaattagagagcaactttttgagatt
gcaattcaaagtgtagcttctgcaagagaaagcagaataagcaagaagggtcgccgcggg
gctgaacatgctccagccagtaaagcaggtggtgctgtattggacctgatgaagctattt
ggtcataaatctactgttgtccggaaaagaaaggagtgggatgtatacgaacccattgtt
gatcttctatctaatgaggaagtggatgcccttgaagcaagagaagagaggaatttttgg
tga
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