Corylus avellana (European hazelnut): 132186242
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Entry
132186242 CDS
T09426
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132186242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132186242
Enzymes [BR:
cave01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132186242
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
132186242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
132186242
NCBI-ProteinID:
XP_059456105
LinkDB
All DBs
Position
ca1:43639551..43669370
Genome browser
AA seq
1160 aa
AA seq
DB search
MGLKQDSEEEPTKKNQDVGKQVPDYPVIDKQFLAAPIKSAVDKFQLVPEFLKVRGLVKQH
LDSFNYFVNIGIKKIVRANNRIVSSVDPDIYLEFKDVKIGDPSMPGDGMEDTISPQKCRL
SDRTYYAPIKVDVEYKTQGSDTQKTSKKDVIIGRMPIMLRSCRCVLYGQDEAELAKLGEC
PLDPGGYFIIKGTEKVLLIQEQLSKNRIIIDTDKKGNINASVTSSTEERKSKTVILMEKG
KMYLQLNQFTKKVPIMVVMKAMGMESDQEVVQMIGRDPRYSVLLLPSIEECARHGVYTKQ
QAIELIESWVKKSTYSGASSEKEGRGLSILRYIFLSNVPVRQDNFRAKCIYVAVMLRRMI
DAILNKDTLDDKDYVGNKRLELSGQLISLLFEDLFKSMIEEAKKRMDMNLARLSRSSRFD
PLQYILGRSISDGLERTLSTGNFNVKRFRMERKGMTQPLSRLSFIGTLGHMTRISPQFEK
SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVE
DLELLSGEELHTQNSFLVIFNGLILGKHRRPQRFASAMRKLRRAGKIGEFVSVFVNEKQR
CVYIASDGGRVCRPLVIADKGISRIKEHHMKELVDGVRTFDDFLRDGLIEYLDVNEQNNA
LIALYEGEATPETTHIEIEPLTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ
FCRMDTLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
LDRGFGRCIVMKRLTALTQRYENNTEDRIIRPNREGDNAGKMQILDDDGIAAPGEIIRKD
DIYINKQSPIDTRGAMVSHAELADRAYRPSYQTYKGIEGESCVVDRVALFNDRNNNLSIK
FSIRQTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGK
MIELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISEVLVDKGFSYNGKDFLYSGITGCP
LQAYIFMGPIYYQKLKHMVLDKIHARGNGPRLMLTRQPTEGRAREGGLRVGEMERDCLIA
YGASMLIFERLMISSDPFEVQVCRQCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACK
LLLQELQSMNIVPRLKLAEA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcaagcaggactccgaagaagagcccacaaagaaaaaccaagatgttgggaag
caggtgcctgattatcccgtcatcgacaagcagttccttgccgcccctatcaaatccgcc
gtcgacaaattccagcttgttccggagtttctaaaggtgagagggctggtgaagcaacat
ttggattcgtttaattactttgtgaatatcggaatcaagaagattgttcgtgccaataat
cgcatagtatcaagcgtcgacccggatatttatctcgagtttaaagatgtcaaaattggt
gatccctcaatgcctggggatggtatggaagatacaatttctcctcaaaagtgccggtta
tctgataggacgtattatgctcccattaaggttgacgtagaatacaaaactcaaggaagt
gatacccaaaagacatcaaagaaggatgttattattggaagaatgcctattatgttaagg
agttgccgctgtgtcttatatggacaagatgaagctgaacttgcaaaacttggtgagtgt
ccccttgatcctggaggatattttattataaaagggacagagaaggtgttgttgatacaa
gagcaactatcgaagaataggattattattgatactgacaagaaggggaacataaatgca
tctgtgacaagcagtactgaggagcgaaagagcaaaacagttattttgatggaaaaaggg
aagatgtatttgcagctaaatcagtttacaaaaaaggttcctataatggtggtcatgaaa
gctatgggaatggagagtgatcaagaagttgtacagatgattggaagagatcctcgatat
agtgtcctacttttgccttctattgaggaatgtgcaaggcatggtgtatacacgaaacag
caagccatagagctaatcgaatcatgggtgaagaaatctacatattccggtgcttcatca
gaaaaggaaggtagaggtttatcgatccttcgatatatatttctctctaatgttccagtg
cgtcaggataatttccgtgcaaaatgtatatatgttgcggtaatgttaagacgcatgata
gatgcaattctgaataaggatacactggatgacaaggattatgtgggaaacaagcggttg
gagttgtctggtcagttaatttctctgctctttgaggatttgttcaagtcgatgattgaa
gaagctaagaagaggatggacatgaacctggcaaggcttagcaggtctagccgatttgac
cctttgcaatatatacttgggcgcagtatttctgatggcctagaaaggacactttctact
ggtaacttcaatgtcaaacggttcaggatggagaggaaaggcatgacacagcctctatct
aggttatcctttatagggactttggggcacatgacaagaatatcaccacaatttgagaag
tcgaggaaagtaagtggacctcgagctttgcaacctagccagtggggaatgctttgccca
tgtgatactccggaaggtgaagcttgtggtctggtaaaaaacttggccctgatgactcat
gttacaactgatgaagaggagggcccactaatttctctgtgctactgtttgggcgttgaa
gacttggaactactatctggagaagagcttcacacccaaaattcctttctggttatattt
aatgggctgatccttggcaagcatcggaggccacagagatttgcttctgctatgagaaag
ttacggagagctggaaaaattggggagtttgtaagtgtgtttgtgaatgagaagcagcgt
tgtgtttatattgcttctgatggaggtcgagtttgtcgtccacttgttattgctgacaaa
ggcatatcaaggatcaaagaacatcatatgaaggagttagtggatggagtgcgcaccttt
gatgattttttaagagatggattgattgagtatcttgatgttaatgagcaaaacaatgca
ttgattgctttatacgagggagaggctacaccagaaacaacacatattgaaatcgagcct
ttgaccatcttaggtgttatcgctgggctcattccatatcctcatcataatcagtcacct
agaaatacttatcagtgtgcaatggggaagcaagccatgggaaatattgcatataaccag
ttctgtcggatggacacacttctttacctgctggtgtatcctcaacgacctttgttgaca
acaaaaacaattgagctggttggatatgataagcttggagcagggcagaatgccactgtc
gctgtgatgagctatagtggctatgatatagaggatgcaattgtcatgaacaaatcatct
ttagatcgtggatttggacgttgtattgttatgaaaaggttaactgccttgacacagagg
tatgaaaataacacagaggacaggattattaggcccaatagagagggagataatgcagga
aagatgcagatactggatgatgatgggattgctgccccaggggaaattattaggaaagat
gacatatatataaataaacagtccccaatcgatacaaggggggcgatggtatctcatgca
gaattagcagatagagcgtataggcccagttatcaaacatataagggtattgaaggggag
tcttgcgttgttgatcgagtggctctttttaacgataggaataataatttaagtatcaaa
ttctcaattcggcagacacgtaggccagaggttggtgacaaatttagtagcagacatggg
cagaaaggtgtttgtggcaccattatccagcaggaagactttccattttcagaacgtggc
atttgccctgatttgattatgaatcctcatgggtttcctagtcgaatgactgtaggcaag
atgatagagcttcttgggggtaaggcaggagtttcatgtggtaggtttcattatggcagt
gcctttggggagccaagtggtcatgcagatacagttgaagccataagtgaagttcttgtg
gacaaaggctttagctacaatggcaaagacttcctttattcaggtatcacaggttgccca
ttacaagcatatattttcatggggccaatttactaccaaaaattaaaacatatggtccta
gataaaatacatgctcgaggtaatgggccccgtctcatgctaacaagacagccaacagaa
gggagagctcgtgaaggaggactacgggtaggagaaatggaacgtgattgtttgattgct
tatggtgctagtatgctaatttttgagcgcctgatgatctctagtgatccttttgaggtt
caggtttgtagacaatgtggtttgttaggatattacaaccataagctaaaaactggaatt
tgttcgtcatgtaaaaatggggataatatttctactatgaagcttccatatgcgtgcaag
ctcttactacaggaactccaatcaatgaacattgttccccgcttaaagctagccgaggca
tga
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