Corylus avellana (European hazelnut): 132186307
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Entry
132186307 CDS
T09426
Name
(RefSeq) uncharacterized protein LOC132186307 isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132186307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132186307
Membrane trafficking [BR:
cave04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132186307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Clathrin
WD40
Beta-prop_EML_2
ANAPC4_WD40
TPR_VPS8_2
Beta-prop_EML
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_HPS5
zf-RING_Vps41
zf_RING_Vps8
MinC_N
Motif
Other DBs
NCBI-GeneID:
132186307
NCBI-ProteinID:
XP_059456191
LinkDB
All DBs
Position
ca7:6746778..6764041
Genome browser
AA seq
1940 aa
AA seq
DB search
MTKSLATTEFPPPTMELDLDAFLNSPLTSDGDDDDPENPNSVLHRTIDEILNASDSSTSS
SPPTSPLSIHIRALNPKQEVSQSVNDAVSVSLPKAPSESSISETQTVQSKPGSFARVRPG
GGFSDDTLRRALPSLFGGVRPNAKPGAALAAAAAASRALPTPHAAAIKSRRAANSQLVSD
GLDSANGIRDEKMGDFQSAEVSRGNEVLEGVKDEGFGELSHGKEVESEAENVAQVDGLRV
SDNDEELAETSTPISNSNVEPVNVEEDASNANPDEDACVVDENNSEVLDADGSEDKGGHS
LDEFHEKRKVEEDSTMEALETRDLGKDIHGLKDDEDTSSLSDITELVEERIGQLESRRIS
KRAEQKSRASMKPLELAEELEKKNASTGLHWEEGAAAQPMRLEGVRRGSTTLGYFDIESD
NTITRTISSHLCRRDYGSPQVLAVHTSYIAVGMSKGVILVVPSKYSCYNPDHMDAKTLML
GVQGDRSHAPVTSMCFNHQGDLLLAGYGDGHITVWDIQRSSAAKVITGEHTLPIVHTLFL
GQDSQVTRQFKAVTGDSKGLVLLHAFSVVPLLNRFSIKTQCLLDGLKTGLVLSASPLLFD
EFSGVASLSSQGNNAVSSSSLGSMVGGVVGGDAGWKLFNETSSLVEEGVVIFVTQQTALV
VRLTPTLEVYAQLSKPDGVREGAMPYTAWKCMTQSRGSPTENMPVEAAERVSLLAIAWDR
KVQVAKLVKSELKVYGKWSVDSPVVGLAWLDDQMLVVLTLTGQLCLFTKEGTVIHQTRFS
VDGSGGDDLVAYHTHFVNSFGNPEKAYHNCIAVRGASVYVLGPMHLVISRLLPWKERIQV
LKKAGDWMGALNMAMTLYDGQAHGVIDLPRSLDAVQEAIMPYLVELLLSYVDEVFSYILV
AFCNQIEKVEQLENPNSRSSSVHSEIKEQYTRVGGVAVEFCVHIKRTDILFDEIFSKFVA
VQQIDTFLELLEPYILRDMLGSLPPEIMQALVEHYSSKGWLQRVEQCVLHMDISSLDFNQ
VVRLCREHGLYGALVYLFNKGLNDFRAPLEELFVVLRNSLKESAAALGYRMLVYLKYCFS
GLAFPPGQGTLPTTRLPSLRTELLQFLLEKSDALNSQAVSSLSSGGAYLNLYHLLQLDTE
ASLDVLRCAFVEDEIPKPNFSSHDSADENMEVKKEDDSGCKNLLVQDTLNALVHILSRDI
FQTERSGSKDVMGSVEEWPSKKDIGHIYEFIAYYVACRRANVSKSVLSQILEYLTSQNTF
PPSVSTHRIISKRREKQVLALLEVVPETDWNDSHVLDLCEKAQFYQVCGFIHSIRHRYLA
ALDSYMKDVDEPIHAFSFINKTLLQLSDSELAVFQSAVISRIPELVDLSREGSFFLVIDH
FNKEASHILSELHSHPRSLFLYLKTVIEVHLSGTLNFSYLRQDDFMDSSDGRRVKDQSRG
LEFYMEKISDFPKFLRNNPVEVTDDMIELYLELLCQYEPDSVLKFLETFDSYRVEHCLRL
CQEYGIIDAAAFLLERVGDVGSALLLTLSGLDSKFVELDTALGGLVSNGTSSSAAGTEDF
CTVLYMKEVNAIHNILNACIGLCQRNTPRLNPEESETLWFRLLDSFCDPLMDSYGDEMVS
GGENHVQMLPESSASHEDEEAGIVKWRISKSHRGAHILRKLFSRFIKEIVEGMIGYVRLP
TIMSKLLSDNGSQEFGDFKLTILGMLGIYGFERRILDTAKSLIEDDTFYTMSLLKKGASH
AYAPRSFICCICNCLLMKDSSSFSIRVFNCGHATHLQCEVPENEATSRGTSSGCPICMPK
KKSQKAKNKSILPDNGLVSKFSSRPQQARGTNILHPHESDASENPYGLQPISRFEILASL
QKDQRFALIENMPQLRLAPPAVYHERVKKGTDIFTGESSNGLTKIEKPGKIRQLRELRVK
GSSRFPLKSSIFGKQKSSKR
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagagcctcgcaacgaccgaatttccacctccgacaatggaactcgacctcgac
gccttccttaactctcccctcactagcgatggcgacgatgacgaccccgagaaccccaac
tctgtacttcaccgcacaatcgacgaaatcctcaacgcctccgattcctccacgtcatct
tcgccccctacctccccgctgtccattcatatacgcgccttaaatcccaaacaagaagtc
tctcagtccgttaacgacgccgtctcagtctcccttcctaaagccccctcggagtcttca
atctccgaaacccaaacggttcagtccaaaccaggctccttcgctcgggtcaggcccggc
ggtgggttctcggacgacacgcttcggagggcgctgccgtcgctgtttggcggggtcaga
ccgaacgcgaagcctggggcagcgctggctgcggcggcggcggcgtcgagggctctgccg
accccgcacgcagcggcgataaagtcgaggagggccgcgaattcccaattggtttcggat
gggttggactctgcgaatggaattcgtgatgagaaaatgggcgacttccagtctgctgag
gtttcgagagggaatgaggttttggagggtgtaaaagatgagggttttggcgagctttct
catggtaaagaggtcgaaagcgaagcggaaaatgtggctcaagtggatggattaagggtt
agtgataacgacgaagaattggcggaaacaagcactccaatttcaaattccaatgttgaa
ccggtgaatgttgaggaggacgcgagcaatgcaaatccagatgaggatgcttgtgtggtg
gacgagaacaattctgaagttttggatgctgatggttcagaagacaagggcggtcattct
ttggacgaatttcatgagaaacggaaggttgaggaggactctacaatggaggccttggaa
acacgggatttggggaaagacatccatggcttgaaagatgacgaggatacgagttcatta
tctgatatcactgagcttgtggaggagagaattgggcagttggagagtaggagaattagt
aaaagagcggaacagaaatcacgggcttcgatgaagccgctggaattagctgaggagctt
gaaaagaagaatgcttccactggtttgcattgggaagagggtgcagctgctcaaccaatg
aggcttgagggcgtacggagggggtcgaccacgttgggatactttgatattgagtcggac
aatactatcacacggaccatttcttctcatctatgcaggagagattatggttctcctcaa
gtcttggctgttcatacgagttatattgcagtgggaatgtcaaaaggggtcattttagtc
gtgcccagtaaatattcctgttataatcctgatcacatggacgcaaagacattgatgctt
ggtgtgcaaggggatcgatcacatgcccctgtaacttccatgtgcttcaaccaccaggga
gacctgctcttagctggttatggtgatggtcatattactgtttgggacatacagagatca
tcagctgcaaaggttattactggagagcatacattaccaatagtacatacattgtttctg
ggtcaggattctcaggttactcgtcaatttaaagcagttactggtgatagtaagggtcta
gttctgttgcatgctttctcagtggttcccttactcaataggttctccatcaaaacccag
tgtctccttgatggactaaaaaccggacttgtgctatcagcttcaccactcctttttgac
gaattctctggagttgcttccctgtcctctcagggaaacaatgcagtttcttccagtagt
cttggtagtatggtgggaggcgtagttggcggagatgcaggctggaaactctttaatgaa
acctcttctttagttgaagaaggtgtggtcatatttgtcacccaacaaactgctctagtg
gtaaggctcactccaactttggaagtctatgctcaactttctaagccggatggggttcgt
gagggtgctatgccttatactgcatggaaatgcatgacacagtcacgtggttcacctact
gaaaatatgcctgtggaagcagcagagagagtttccttgctcgcaattgcttgggatcgg
aaagttcaggttgcaaagttagtcaaatcagagctaaaagtatatgggaaatggtctgtt
gacagtccagttgtaggtctggcttggttggatgatcagatgctggtggtgctcacatta
actggacaactctgtttgttcactaaggaaggaactgtgattcaccaaacaagattttct
gtggatggctctggaggagatgatcttgttgcatatcatactcacttcgtcaattccttt
ggaaaccctgagaaagcttatcacaattgtatagctgtaagaggagcttctgtatatgta
cttggacctatgcatcttgttatttctcgccttctcccatggaaggaacggattcaggtt
ctgaagaaagcaggtgactggatgggtgcccttaacatggcaatgacactttatgatggc
caagctcatggcgttattgacctccctagaagcttggatgctgtacaggaggccataatg
ccgtacctggtagagttgcttttgtcatatgtagatgaagtattttcctatattttggtg
gcattttgcaaccaaattgaaaaagtggaacagctggaaaacccaaatagtagaagcagt
tctgtgcactctgaaataaaagagcaatacactcgcgtgggtggagttgctgttgaattc
tgtgttcatatcaagaggactgacattctttttgatgaaattttctccaagtttgtggct
gttcaacagatagacacatttttggagcttttggagccatatattttgagggatatgctt
ggatctctaccacctgagattatgcaagcactcgtagagcattatagcagcaaggggtgg
ttacagcgagttgaacaatgtgtccttcacatggatatctcttccttggatttcaatcag
gttgtcaggttatgtagggagcacggattatatggtgctctggtttatctcttcaataaa
ggattgaatgattttagggctcctttagaggagctgtttgtggtgttgcgaaatagtcta
aaggaaagtgctgctgcccttgggtataggatgcttgtttatctgaaatactgcttttca
ggtcttgcttttccaccaggacaaggaactctgcccactacacgcttgccatcacttagg
accgaacttctacaatttctactagaaaaatctgatgccctgaattcacaagcagtttca
agcttatcatctggaggagcatacctgaacctgtatcatcttttacagttagatactgaa
gctagtttagatgttctgagatgtgcgtttgtagaagatgaaatcccaaaacccaacttt
tcatcgcatgattcagcagatgaaaatatggaggtgaaaaaagaagatgatagtggatgt
aaaaatttattggttcaagatacgttgaatgctcttgttcatattcttagtagggacatc
ttccaaactgagaggtctggtagcaaagatgtcatgggatcagttgaagagtggccttca
aagaaagacataggtcatatttatgagtttatagcatactatgttgcatgtagaagagct
aatgtctcaaaaagtgtactgagtcagattttagagtatttaacatcacagaatactttt
ccacctagtgtttccacacatcgtataatttcaaaaagaagagagaagcaggtgcttgcc
cttctagaagtagttcctgagactgactggaatgattctcatgtgttagatctatgtgag
aaagcacaattttaccaggtttgtggctttattcatagtatcagacaccggtatcttgct
gcattggatagctacatgaaagatgtagatgaacccattcacgcattctcctttatcaac
aaaacattattacagctgagtgacagtgaacttgccgtttttcagtcagcagtcatctct
cggatacccgagctggttgacttaagcagagagggttcgttcttcttggtcattgatcat
ttcaacaaagaagcttcacatatcctgtctgaacttcactctcatccacgaagccttttc
ctctatttaaaaacagtcattgaggttcacttatctggcaccctcaatttttcttattta
agacaagatgattttatggattcttctgatggaagaagggtaaaggatcagtctagagga
cttgagttctacatggagaaaatctctgatttccccaagttcctgcgtaataatccggtt
gaagtgactgatgatatgattgagctttatctggagctattatgtcaatatgaacctgat
tcagttctcaaattcctggagacatttgatagctatcgtgtggaacactgtttacgcctg
tgccaggaatatgggattatagatgctgccgcattcttattagaaagggttggtgatgtg
gggagtgctcttttacttacactttcaggccttgatagcaaatttgttgagcttgatact
gccttgggaggtttagtttctaatggtacttcgagttctgctgctggtacagaggatttc
tgcaccgtattatatatgaaggaggtgaatgctatacacaatatattgaatgcctgtatt
ggattgtgtcagcggaacacccctcgtttgaaccctgaggagtcggagacactttggttc
agattactcgactcgttttgtgaccctctaatggattcatatggtgatgaaatggtgtct
ggaggagaaaatcatgttcaaatgctacctgaatcatcagcctcacacgaggatgaagag
gcaggtatagttaagtggagaatctcaaaatcccatagaggggctcatatcttgagaaaa
ttgttctctcggttcatcaaagagattgtcgagggaatgataggatatgttcgcctccca
actatcatgtcgaaactcctctctgataatggcagccaggagtttggtgattttaaactt
accatattgggcatgcttggaatatatggctttgaaagacgaattctggatactgccaaa
tccttaatagaggatgatacattctataccatgagcttactcaagaagggggcctctcat
gcatatgcaccccggagttttatatgttgtatatgtaattgcctgctcatgaaggactct
tctagctttagcattcgagtttttaactgtggccatgcaactcatctccaatgcgaagtt
ccagaaaatgaggcaacaagtagaggcacctcatctggatgcccgatttgtatgccgaag
aagaaatctcagaaagcaaaaaataaatcgattcttcccgacaatggtttagtgagtaaa
ttttcgtccagacctcaacaagcacgtggaactaatattctacacccgcatgaaagtgat
gcgtcagagaatccctatgggcttcagccaatttcacggtttgagatcttggctagtttg
cagaaagaccagagatttgccctgatagaaaacatgcctcagttgaggcttgcaccaccg
gctgtgtatcatgaaagagtgaagaaaggaacggatatttttactggggaaagtagcaat
ggccttacaaaaatagagaaaccaggcaaaatcaggcaactgagggagctaagagtaaag
ggatcatctcggttccctttaaaatcaagtatatttggcaagcagaagagcagcaagcgg
taa
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