KEGG   Corylus avellana (European hazelnut): 132186417
Entry
132186417         CDS       T09426                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
cave  Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:cave00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cave03036]
    132186417
   03400 DNA repair and recombination proteins [BR:cave03400]
    132186417
Chromosome and associated proteins [BR:cave03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    132186417
DNA repair and recombination proteins [BR:cave03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     132186417
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ RICTOR_N DNA_pol3_beta
Other DBs
NCBI-GeneID: 132186417
NCBI-ProteinID: XP_059456370
LinkDB
Position
ca7:complement(8010101..8034502)
AA seq 1145 aa
MAAPGQLIQLIESFVSLSRSPSQQAASLDTIASLVKNDVLTMKGLVREMEMYLTATDNVI
RARGILLLGEVLLSLPSKPLDNTTIHSLMEFFTDRLADWKALRGALVGCLALMRRKSTAG
MVTSSDAKAAAHCFLQDLQVQSLGQHDRKLCFELLECLLERYPSAVAPLGDELIYGICEA
IDAEKDPQCLMLTFHIVELLVRLFPDPSGPLASFVGDLFEILGCYFPIHFTHPKGEDLDI
KRDDLARALMSALSSTPLFEPFAIPLLLEKLSSSLPFAKVDSLMYLNSCTLKYGAERMEK
HAEAIWLSIKDAIYTSLQGPALSSTSEYLDSLGFQENEIAREALALLQQVIMQNNGLFLG
FIIKDEDVNMILNTVTHYERYNDIPSQGKLKLHAVGCILSISTKSSITSCNRVFESFFPR
LMEILGLSVRNSSGVHSPNDNHLLSKRLNFGVLYLCVELLSAHRDLIAGSKEIASQYVSA
FETCYCMLQSYSTSLTKAFCSTLATTPHDAHIHFGVKGLQILATFPGDVSPIPISEFEKI
LITFMSIISVNFSETLKWKLALKALVNIGSFIDRYHESEKVSSYMGLVVEKIVSLVSLDD
LTMPFPLKLEAISGIGTSGLNYMLNIVQGLEEAIYANVSEVYVHGNLKSAEITVRLLECY
SNKVLPWIHDNGGNEGVLLRFPVNIWNQIESSVDFSVQVQEKELLDAMMTAMRHAVAFCT
EESQNKIIQKAYSILSLSTSFPLKEFTSLTIPFQLDWRQLTQRIDNLSHRDEWILLLFAS
VVIAVRPQTHIPNVKGILYLFMTTLLKGYLPAGQALGSMVNKMGTKSSGSEISSDCTLEE
ALDIIFQMKLWNQIHSLCSGMANGSEMGDTDLCPSVANNRLHQIHAIAGLSWIGKGLLLR
GHEKIRDVTKIFLDFLPSNNRMDALPLKHHSLENSFEHDLHPSVMKSAADAFRILMSDSE
VCLNREFHAIIRPLYKQRFFSTMMPILQHLIMKNDSSFSRSMLYRAFAHIISDTPLIAIL
SEAKLLPILLDCLSMLNKDIQDKHSLYRLLLVLSGILTDKNGQKAAIENARLVVNCLTGL
IAYPHKMLVRETAIQCLVAMSELPHARIYPMRIQVLRAISKALDDPKSAVRREAVRCRQA
WASLA
NT seq 3438 nt   +upstreamnt  +downstreamnt
atggcagcaccggggcagttgattcagctcattgagtcgttcgtcagcttgtctcgctct
ccgagtcagcaggctgctagcttggacacaattgcttctcttgtgaagaatgatgtatta
actatgaaaggactggtcagagagatggagatgtatttgactgctacagataacgttatt
cgtgcaagaggtatccttctccttggggaagtgcttttgtctcttccatcaaagccacta
gacaatactactatacatagcttgatggagttcttcaccgacagattggcagattggaaa
gctttacgtggtgcacttgttggttgcttggcactaatgaggagaaaaagtactgctggt
atggtgactagctctgatgcaaaagcagctgcccactgttttttacaggacctacaggtg
caatctttaggacagcatgataggaagctgtgctttgaacttctggagtgcctgttggaa
cgctaccccagtgcagttgctccattgggtgatgagcttatttatggaatctgtgaagct
attgatgcagaaaaggatcctcaatgcttaatgctaacatttcatatcgttgaacttctg
gtgcggctatttccagatccatctggtccacttgcaagttttgttggggatcttttcgaa
attctgggctgttactttcccattcattttacacatccaaaaggtgaagatcttgatatc
aaaagggacgaccttgcaagggcactaatgtcagctttgtcctccactcctctttttgag
ccatttgcaattccattgcttcttgaaaaactttcttcttctctgccgttcgcaaaggtc
gattccctgatgtatctcaacagttgcacgttgaagtatggagcagaaagaatggaaaaa
catgctgaagctatatggttatcaattaaagatgcaatatatacttcactacaagggcct
gctttatcttctacttcagaatatctagacagtcttggctttcaggagaatgaaattgcc
agagaagctttagcacttctgcagcaggttattatgcaaaataatggtttgtttttaggt
tttattattaaagatgaagacgtaaatatgattttgaacactgttactcattacgagaga
tataacgatattccctcgcaaggcaagctgaaattacatgcagttggttgtatcctttct
atttctacaaagagttccattacttcctgcaatagagtgtttgaaagtttcttcccccgc
ttgatggaaattctagggctctctgtaagaaattcatccggcgttcactcaccaaatgac
aatcatttactctccaaaagactaaattttggggttctttatctctgtgttgaacttctt
tcagcacacagagatttgattgcgggctccaaggaaattgcatctcaatatgtttctgca
ttcgagacatgttactgcatgcttcagagctattcaacttcattaactaaggccttttgc
tctaccttggcgacaactcctcatgatgcacatattcattttggagtgaagggtttgcag
attctggctactttcccaggagatgtttctccaataccgatatctgagtttgagaaaatt
ttgatcacattcatgtcaattatctcagtgaatttcagtgagacattaaaatggaaattg
gcattgaaggcgttggtgaacattggttcatttattgatagatatcatgagtctgagaag
gtttcaagctatatgggtttagtagttgaaaagattgtttccctggtgtctcttgatgat
cttaccatgccttttccactcaaactggaagcaatatctggcattggcacaagtgggctg
aattatatgctgaacattgtccaaggattggaagaagctatatatgccaatgtatctgag
gtttatgtccatggaaatttgaagtcagctgaaatcacagttcggcttttggaatgctac
tctaataaggtgcttccatggatccatgacaatggaggtaatgagggagtgttgctgcga
tttcctgttaatatttggaaccaaattgaaagttctgttgattttagtgttcaagttcaa
gaaaaggagcttcttgatgcaatgatgactgcaatgaggcatgctgttgcgttttgtaca
gaagaaagccagaacaaaataattcaaaaagcttacagcatactttcactaagcacttct
tttcctctaaaggaattcacatctctcaccattccattccaactggattggcgacagctc
actcagaggattgacaatttgtcccatagagatgaatggattcttttgctatttgcatct
gtagttatagcagttcgtccccaaacgcacattccaaatgtaaaaggaatcttgtatttg
tttatgacaactcttctcaagggttatcttccggcaggtcaggcattgggttccatggtt
aacaaaatgggtacaaaatccagtggatcagagatttcaagtgactgtaccttggaagaa
gcactagatatcatttttcaaatgaaactatggaaccagatacatagtttatgcagtgga
atggcgaatggaagtgaaatgggtgatactgatttatgccctagtgttgcgaacaatagg
ttgcaccagatacatgccattgctggactatcatggattggaaaaggtttgcttctgcgt
ggtcatgaaaaaattagagatgtaacaaagatttttctggattttttaccgtcaaataat
agaatggatgccttgccattaaagcatcattcactggagaacagttttgagcacgatttg
catccctctgtgatgaaaagtgcggcagatgcatttcgtattcttatgagtgattctgaa
gtttgtttgaatcgagagtttcatgcaataatacggccactctataagcaacgttttttc
tctaccatgatgcctattttgcaacatttgataatgaaaaatgattcatcattttccaga
tctatgctgtatcgggcatttgcacatattatatctgatactccattaattgctatttta
agcgaagccaagctcttacctattcttctggattgcttatccatgttgaacaaggatatt
caggacaaacattcattgtacagactcctgctagtcttatctgggatattgacagataaa
aatgggcaaaaagctgccattgagaatgctcgtcttgtcgttaattgcctcacaggactt
attgcctatcctcataagatgcttgtacgggagacagcaattcagtgtctggtcgccatg
tctgagcttccccatgcaaggatctatcccatgagaatacaggtactccgggctatatca
aaggctcttgatgaccctaagagtgcagttcgtcgggaagctgtcagatgccgacaggca
tgggcatcacttgcataa

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