Corylus avellana (European hazelnut): 132186437
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Entry
132186437 CDS
T09426
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132186437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132186437
03036 Chromosome and associated proteins [BR:
cave03036
]
132186437
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132186437
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132186437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
132186437
NCBI-ProteinID:
XP_059456397
LinkDB
All DBs
Position
ca7:22568127..22576540
Genome browser
AA seq
1066 aa
AA seq
DB search
MASPALLPVSGSSSELRGTRNISFSTSCGMDFDVGTSSEVVSQYKKRRIPQKTDFQSCEV
LRDIEVILPNLRSADYYTKPCLKELAARELADPGYCSRVLDFTIGRVGYGSVKYLGETDI
RQLDLDDIVKFHRHEVVVYENENAKPVVGQGLNKAAEVTLVLRVRSLGFEEGKLEMVGDK
LRMSAEKQGAHFISFDPANGEWKFLVQHFSRFGLSDDDEEDIVMDDATAAQNPVGVNGGE
IPDIDEEHVGPNGVLLSHSLPAHLGLDPVRMREMKMLMFPDEEEEAEDFKEILTCQKPSF
GKEYIRPLHSAQRMSHRSSPPVARKTPLALLEYNHGSFDSNSPGAILMVPQNKGMSLKPI
KPEGSGFKLDLKQETPVTGSHSRNIVDAGLFMGRSFRVGWGPNGILVHTGTPVGSNDSQR
VLSSVINLEKVAIDKVVRDENNKVREELIGFAFDSPLNLHNEINHETKVVEVGSFKLRLQ
KLVSDRLMLPEICRKYGDILERRLDVPGLASSTRVVLSHQVMVWELIKVLFSNRANSSKS
KSLGADNEEDMMQDMKEASSDVDLEALPLIRRAEFSLWLQETVCPHVQDTISSLNESNYL
EHVFLLLTGRQLDAAVELAASKGDVRLACLLSQAGGSMVNRADVLRQLDLWRINRLDFSF
IEKDRLRLYELLSGNIHGALHDVNVDWKRFLGLLMWYQLPPNTSLPVVFHAYQHLVDDGK
APYPVPVYIDEGPVDEVIKWGTEERFDFSYYLMLLHASEEGEFGDLKTMFTALCSTNDPL
DYHMIWHQRAVLEAIGAITSNDLHVLDMGLVSQLLCLGKCHWAIYVILHMPYREDFPYLH
VNLIREILFQYCELWSSEESQSQFIENLGVPVAWLHEAMAVYFSYCGDFSKALEHFLQCA
HWQKAHTIFITSVAHKLFLAAKHSEIWRLATSMEDHKSEIENWELGAGIYISFYLLRSSL
QEDNNTMSELDSFESKNAICREFLGRLNESLAVLGGRFQVDARVAYSKMAEEICGLLLSD
IEGSTCDGQLSCFDTVFSAPIPEDLRSSYLQGAVSVFTCFLSEVAT
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcctgctctgctcccggtttctgggagttccagtgaacttcgtggtacgaga
aacatctcatttagtacttcatgtggtatggactttgatgtgggaactagttcagaagtt
gtatctcagtacaagaaaagaaggatccctcaaaagaccgattttcagtcatgtgaggtt
ttgagagacattgaagttatattacctaatttaagatcagctgattattatacgaaaccc
tgtttgaaggagttggctgcccgggaacttgcagaccctggttattgtagccgagttttg
gatttcacgattggaagggttggttatggatcagtcaaatatcttggggagactgacatt
agacagttagatttagatgacattgtgaagttccataggcacgaggtagttgtgtatgaa
aatgaaaatgccaagcctgtggttgggcagggacttaacaaggctgctgaggtgactttg
gtccttcgagtaagatcactaggtttcgaagaggggaaactggagatggttggggataaa
ttaagaatgagtgcagagaaacaaggggctcacttcatttcatttgacccagcaaatggt
gaatggaaattcttggttcaacatttcagcagatttggattgagtgacgatgatgaagaa
gatattgtaatggatgatgcgactgcagctcagaatcctgtgggggtgaatggcggtgag
attcctgatattgatgaagaacacgtgggccctaatggtgtgttgctctctcactctctt
ccagctcatcttgggcttgacccagtaagaatgagagaaatgaaaatgttgatgtttcct
gacgaggaagaggaggcggaagattttaaggaaatactgacatgtcagaagccatctttt
ggtaaagaatacataagacctttacactctgctcagaggatgagccatcgatctagtcca
ccagttgctcgaaaaacccctttagcattgcttgagtacaaccatggtagttttgactca
aactctcctggagctattctgatggtcccacaaaataagggtatgtcattgaagccaata
aaacctgaaggttcaggttttaaactggacctcaagcaagaaacaccagtaactggaagc
cattctcgcaacatagtggatgcaggtttgttcatgggtaggtcatttcgagtagggtgg
ggcccaaatgggatccttgttcacactggtacacctgtaggtagtaacgattctcaaagg
gtgttatcatctgttatcaatttagagaaggttgctattgataaagtggttagagacgaa
aataacaaagtcagagaggaacttattgggtttgcttttgattctccattaaatctccac
aatgagataaatcatgaaacaaaagtagttgaagttggttccttcaaactgaggcttcaa
aaacttgtctcagatcgcctaatgcttccagagatttgtaggaaatacggagatattctg
gagaggaggttggatgttcccgggctagcttcctctactcgtgtggttttgtctcatcaa
gtaatggtctgggaattgataaaagttcttttttccaatcgggcaaatagttcaaagtcg
aagtccttgggtgctgataatgaggaagacatgatgcaggatatgaaggaagcttcttca
gatgttgacctagaagcactacctcttattcgaagggcagagttcagcttatggttgcaa
gagactgtttgccctcatgtacaagatacaataagctccttgaatgagtccaattatcta
gaacatgtattcttactcttgactgggcggcagcttgatgcagctgtggagctggcagct
tctaaaggagatgtgagattggcctgtttattaagtcaggctggtggttccatggttaac
cgtgctgatgttttgcggcagcttgatctttggagaatcaataggctggatttcagtttc
attgagaaggaccggttaagactttatgaattgctttctggtaatattcatggtgctttg
catgatgtgaatgttgattggaagaggtttctagggttattgatgtggtatcaactacca
cctaacacttcattgcctgttgttttccatgcatatcaacatcttgttgatgatggaaag
gctccatatcctgttccagtgtacattgatgaaggaccagtagacgaggttattaaatgg
ggtacagaggaacgttttgacttctcatattatcttatgcttcttcatgccagtgaagag
ggagagtttggcgatttgaagacaatgttcactgccttatgttcaacaaacgatccactt
gattaccatatgatctggcatcagcgtgcagtgttggaagcaattggtgctataacttct
aatgatcttcatgttctggacatgggacttgtctcgcagctgttgtgtctggggaaatgt
cattgggccatctatgtgatccttcatatgccctaccgtgaagattttccatatctgcat
gtgaatctcattcgggaaatcttgttccagtactgcgaattgtggagttcggaagaatca
caaagccagtttattgagaacttgggcgttccagttgcgtggcttcatgaggctatggca
gtttactttagttactgtggggatttctcaaaggcacttgaacactttcttcaatgtgca
cattggcaaaaagctcatactattttcataacgtcggttgctcataaattgttcttagca
gccaaacactcggagatatggaggcttgctacttctatggaggaccataagtctgaaatt
gaaaattgggaattgggagctggaatttatatttcattctatctattgagatcttcattg
caggaagataacaatactatgagtgaactggattcttttgagagcaaaaatgctatttgt
agagagtttcttggccggttaaatgagtctttggcagttttgggtggcagatttcaagtt
gatgcaagagtagcttattcaaaaatggctgaggagatatgtggtttgcttctttctgac
attgaaggctcaacctgtgatggtcagctaagctgctttgacactgtttttagtgctcct
attcctgaagaccttcgctcaagttatctgcagggtgcagtgtctgttttcacgtgcttt
ctttcagaggtggctacatag
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