Corylus avellana (European hazelnut): 132186793
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Entry
132186793 CDS
T09426
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132186793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132186793
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
132186793
Prokaryotic type
Archaeal type
TFB
132186793
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
132186793
NCBI-ProteinID:
XP_059456838
LinkDB
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Position
ca7:complement(1084105..1087886)
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AA seq
524 aa
AA seq
DB search
MKCPYCSLAQGRCATTSSGRSVTECASCGHVIEERQSQPHHLFHLRAQDNPLCLVTPDLP
SLEAHHDEEDPFEPTGFITAFSTWSLEPSPLFLSSCLSFSGHLAELERTLESYSSSSSSS
SSSSTVVVDNLRAYMQIIDVSSILGLDHDISDHAFQLFRDCCSATCLRNRSVEALATAAL
VQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLL
QLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTE
VTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRASAPKVDLVEVTSSSDRDK
QSEIKGNKTIECPDTGHLARAKEEAESRGNSLGASNPVLSRPPTFWQPQAPFVTSGSRTV
GEKIPNISRGTDINELHSNHQELERKVDQDTNHATTNSLKPNQLVSLPTSSGSSVSRQFW
PPPIPVPPPNVRFVQPPSVVSGYAEHQGAGSLNGTRNANQFGDT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcccgtactgctccttggcgcaggggcggtgcgccaccaccagctcgggccgg
tccgtaacggagtgcgcgtcgtgcgggcacgttatcgaggagcggcagtcccagccccac
cacctcttccacctccgtgctcaagacaaccctctctgcctcgtcacccccgacctgccc
tccctcgaggcccaccacgacgaagaggacccattcgagcccacaggcttcatcaccgcc
ttctccacctggtccctcgagcccagccctctcttcctcagctcctgcctttccttctcc
ggccacctcgccgagcttgagcgcactctcgaatcttattcttcctcatcgtcgtcttct
tcttcctcttccactgttgtggtcgacaatctgagggcgtacatgcaaatcatcgacgtg
tcctccattctgggcctggaccacgacatttccgaccacgcgttccagttgtttagggat
tgttgctccgccacttgtttgaggaatcggagcgtggaggcgctcgccactgccgctctt
gtccaagccattagggaggcccaagagcccaggaccctccaggaaatctcaattgcagct
aatgtaccccagaaggagattgggaagtacatcaagatacttggagaagctctacaacta
agtcagcccattaatagcaattccatatcagtccatatgccaaggttttgcacacttctc
caactcaacaaatctgcccaggagcttgcaactcatattggagaagttgttatcaataaa
tgcttctgcactcggaggaatcctattagcatctctgcagctgctatttatttggcctgc
caattagaagacaaacgcaaaacccaggcagagatttgtaaggtgaccggcctcactgag
gtcactcttcgtaaagtctacaaggagctgttagagaattgggatgatttgctcccatct
aattacaccccagctgttcctccagagagagcatttcccacaactgtgattgcttcaggc
cgtgcttcagcacctaaagttgatttagttgaagtgacttcttcatcagacagagacaag
caatcagaaatcaaaggtaacaaaacaattgagtgtccagatacgggccatctggcccga
gctaaagaggaagctgaaagtaggggtaactctctcggtgcctctaaccctgtgttgagc
cgaccacccacattctggcaaccccaggccccatttgtgacttctggctccaggacagtg
ggggaaaagattccgaatatctctcgaggaacagacatcaatgaactgcactctaaccat
caagagttggagcggaaggtagatcaggatacaaatcatgcgactactaattccctaaag
ccaaaccagcttgtgagtctcccaacttcaagcggaagttcagtttccaggcagttttgg
cccccacctatccctgtgcctcctccaaacgttcgatttgttcagccaccaagtgtagtt
tctggttatgctgaacatcaaggagctgggagtctaaatggaactagaaatgccaatcag
tttggggatacctag
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