Corylus avellana (European hazelnut): 132186898
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Entry
132186898 CDS
T09426
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
132186898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132186898
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
132186898
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
132186898
NCBI-ProteinID:
XP_059456993
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Position
ca7:complement(6012431..6015961)
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AA seq
650 aa
AA seq
DB search
MEEEREEGGKVRALIEKATNSTAPEVDPRLLKAIKSVVRYSDRELRLAAQTLMDLMKRDH
SQVRYLTLLIIDELFMRSKLFRTILVENLDLLLSLSVGFRRNLPLPAPPAVASVLRSKAI
EFLEKWNSSFGIHYRQLRLGFDYLKNTLKFQFPNLQAHAARIQQERRERERRSKELLLKK
FEMLKENFSSIKEEIKSTIDEIRECLDIVCAKDEFMPLGPIDDEDFEEFRSSELLQIRLN
TLREGQKVHENNDNKVVFDALRELYKLLVTKHLVSVQEGISVLVRVEVADNRVRDSTLKE
LIDIRNCLQSVKKKCEESGCAVPNTTSCDDEEEDFWEEGKIGSLENERSTVPNNQNENLS
MALASIELKNRTLESNNRGSNDNELPSLEGGETGTNSLRNKLLADAPMMSWGYFLNNWGS
NREVLANQRGLELESHWGRVDYDAVIPAEKIAELNVHSTLYKEEQTEIQPCRAPLRKGGL
CQRRDLRVCPFHGRIIPRDDEGKPLNHNSSKDEITLDSGTDLVEQVAKQAVKNVRERDKE
VLKKREIDKRSLKRAKLAKIREHNDVVLRDAALASTSSSAAIGEDMEATNGEKLSARNKK
ETLSSMLRKKVTPKDRLAQRLLNTQVKDATVRELTLGEDSNYREAFPNQW
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagagagaagagggagggaaggtaagggctttgatagagaaggcgacaaac
tccacggctccggaggtggaccctcgcctcctcaaggccatcaaatcggtggtccgctat
tcggatcgggagctccgactcgccgcccagacccttatggaccttatgaagcgcgatcac
tctcaggtaaggtatctcacgcttctcataattgatgaactcttcatgcggtcaaagctt
ttcagaaccatccttgttgagaacttggatctgttactaagtttgagtgttgggttcaga
agaaatctgcctctccctgctccaccagctgttgcatctgttttgcgctcaaaggcaatt
gaattcctggagaagtggaactcttcctttgggattcattacaggcagctcagattagga
tttgactaccttaaaaacaccctcaagttccaatttccaaatctacaggcacatgcagct
cgaattcagcaggagagaagggaaagggaaagaaggtcaaaagagcttttactaaaaaaa
tttgaaatgttgaaggagaacttctcatcaataaaggaagaaataaagtcaacaatagat
gagattagagaatgtttagacattgtctgtgcaaaagatgaatttatgccactgggtcct
atagatgatgaagattttgaagagtttcgttcatctgaactgctgcaaatccgtctcaat
actttaagagaagggcaaaaggttcatgaaaacaatgacaataaagtggtttttgatgca
ttgagggagctatacaagcttctagtgacaaagcatttggtttcagtccaagaaggcatt
tctgttcttgtaagggtcgaagtggcagacaacagggtcagagattccactttgaaggag
ttaatagatatccgaaattgtctccaatcggtgaagaagaagtgtgaagaatcaggttgt
gctgttccaaacactacaagttgtgatgatgaagaagaagatttctgggaggagggtaag
attggatcacttgagaatgagaggtctactgtacccaataatcaaaatgaaaatctttcc
atggcattagcatctatcgagttgaaaaatagaactcttgaaagcaataacaggggttct
aatgacaatgagttgcccagtcttgaaggtggtgaaactggtacaaactctttaaggaat
aagcttctggctgacgctcccatgatgagctggggctatttcttgaataactggggctca
aatagggaggttttagctaatcagcgggggttggagcttgaaagtcactggggtagggtg
gactatgatgcagttatcccagctgagaaaattgccgaactgaatgttcattcaactctt
tacaaagaggagcaaactgaaattcaaccatgccgtgctcctttgaggaaagggggactt
tgtcagagaagagacttgagagtttgcccatttcatggacgtattatacctcgagatgac
gaaggaaagccacttaatcataactcttcaaaggacgagataactcttgattcagggact
gatttagttgagcaggtagcaaaacaagctgtgaagaatgttcgtgagagagataaagag
gtactgaaaaagagagaaattgataaacggtcactgaagcgtgcaaagcttgcgaaaatt
cgggagcacaatgacgtggttcttagggatgctgcattggcatcgacttcaagctctgca
gctattggagaagatatggaggcaactaatggagagaagctgtcggccagaaacaagaag
gaaacactgtcatccatgctgcgcaagaaagtaacaccaaaagataggttagctcagagg
cttttgaatacacaggtgaaggatgcaacagtaagagagcttacattgggtgaggattca
aattaccgagaagccttcccaaatcaatggtaa
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