Corylus avellana (European hazelnut): 132186899
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Entry
132186899 CDS
T09426
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03082
ATP-dependent chromatin remodeling
cave03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132186899
03083 Polycomb repressive complex
132186899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cave03036
]
132186899
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
132186899
Histone modification proteins
HAT complexes
HATB complex
132186899
HDAC complexes
Sin3A-HDAC complex
132186899
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
132186899
PRC2.2
132186899
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
132186899
Heterochromatin formation proteins
Other heterochromatin formation proteins
132186899
Chromatin remodeling factors
NuRD complex
132186899
NuRF complex
132186899
NuRF complex (fruit fly)
132186899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
132186899
NCBI-ProteinID:
XP_059456995
LinkDB
All DBs
Position
ca7:complement(9364435..9380572)
Genome browser
AA seq
467 aa
AA seq
DB search
MRERGKGTEPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY
LSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRE
LPQNSHIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTE
PFVLSGGKDKSVVLWSIHDHISTLAADTGATKSPGSGGTNIKHASKVGGSNDKPVDSPSI
GPRGIYQGHEDTVEDVQFCPTSAQEFCSVGDDSCLILWDARVGSTPVAKVEKAHDADLHC
VDWNPHDVNFILTGSADATVRMFDRRNLTSGEVGSPVHKFEGHSAAVLCVQWSPDKSSVF
GSSAEDGVLNIWDHEKVGQKQESVGSRMPNVPPGLFFRHAGHRDKVVDFHWNASDPWTIV
SVSDDCESTGGGGTLQIWRMIDLIYRPEDEVLAELDKFKSHILTCSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagggagagagggaaaggtacggagccatcggtggacgagaggtacacgcagtggaag
tcgctggtgccggttctctacgactggctcgccaaccacaacctcgtttggccttctctc
tcttgccgatggggtccacagctggagcaagccacttacaagaatcgtcaacgtctttac
ctttcggaacagactgatggcagcgttccgaataccctcgtcatagcaaactgtgaggtt
gttaaacctagagttgcagctgcagagcacatatcacagttcaatgaggaagcacgttct
ccctttgtgaagaagtacaaaactattatacatcctggcgaggtgaacagaatcagggaa
ctcccacagaatagtcatatagtggccacacacacagatagtcctgatgtcctaatttgg
gatgttgaggctcagccaaatcgtcatgctgttctgggagctacaaattctcgtccagat
ctgatactgactgggcatcaggacaatgctgaatttgctcttgctatgtgccctactgaa
ccctttgtgctttctggaggcaaggacaagtctgtagttttgtggagtatacacgatcat
atctcaactttagcagcagacacaggggctacaaagtctccgggttctggaggcaccaat
attaagcatgcttccaaggttggtgggagtaatgacaaacctgtagatagtccttctatt
ggtccacgaggtatctaccaaggccatgaggatactgtagaagatgtgcagttctgccca
acaagtgcacaggagttctgtagtgttggtgatgattcttgcctcatactatgggatgca
agagtgggatctactccagttgccaaggttgagaaagctcatgatgctgatcttcattgt
gttgattggaaccctcatgatgtaaatttcattctgacaggatctgctgatgctactgtt
cgcatgtttgatcgccgtaacctcacttctggggaagttggatcacctgttcataagttt
gagggtcacagtgctgctgtcctttgcgtacagtggtctccagacaagtcatctgtcttt
ggaagttctgctgaggatggcgttttgaacatctgggatcatgagaaggttggccaaaag
caagagtctgtaggatccagaatgccaaatgttcctccaggcttattctttcgacatgct
gggcatagggacaaggttgttgacttccactggaatgcatctgatccctggactattgtc
agtgtgtctgatgattgtgaaagtactggaggaggtggtacactgcagatatggcggatg
attgatttgatttacaggcctgaagatgaagtgttagctgagcttgataaattcaaatcg
cacatattaacatgttcctcttaa
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integrated database retrieval system
