Corylus avellana (European hazelnut): 132187074
Help
Entry
132187074 CDS
T09426
Name
(RefSeq) protein RDM16
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132187074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132187074
Spliceosome [BR:
cave03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
132187074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
DUF726
Motif
Other DBs
NCBI-GeneID:
132187074
NCBI-ProteinID:
XP_059457219
LinkDB
All DBs
Position
ca7:complement(26484272..26490280)
Genome browser
AA seq
872 aa
AA seq
DB search
MDRPSSKRTRDDRDHRDRDHKHRSSRDDKHRDSSDHHHRHRSRHERSHDEIDGNRDRESK
RERSYDDEREREGSRERDRPKHREAKREPSDDDREDRHREKSYDRDGSVERRHSSHSHKR
KERGESEERGDGVEKKARVSERRRFEDGKEANGEERKEKKKERRRFEDRVKEEEEEKRDR
GLEGGKRVSLSEVKVKFKEEVSDDEHFDDAQSTGTANASGSVGNGAALESLTMESRRVPE
TSAPGHPLPTKVSSISTTNENKGVSITRSHEVPGKSSTDGSSSAAGRSGITLDALAKAKK
ALQMQKELSEKLKKIPMLNKGSNSSSDGTRQLGLKEGLKAPSIAAGTGSTAPTAVSAGAT
SSSLTLPISATGPSAPAGLPAIHNIEAVKRAQELAARMGFRQDPEFAPLINLFPGQMAAD
VSVPQKPSKAPVLRLDALGREVDEHGNVVNVTKPSNLSTLKVNINKQKKDAFQILKPELD
VDPDSNPHFDERMGINKTKILRPKRMSFQFVEEGKWSKEAEHIKLKSQFGEAQAKEQKAK
QAQLAKAKAAPDINPNLIEVAERVITKEKPKDPIPEIEWWDVLLLQSGAYGDITDGSVAE
DKLKMEKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAREKDKQEMIRQ
GLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHIDRNVARKLTPAERR
EKKERKLFDEANTLESIVSVYRINDLSHPQTRFKVDVNAQENRLTGCAVISDGITVVVVE
GGNKPIKRYGKLMLKRINWASAVKEEDEDGDEGDDKPANKCVLVWQGCVAKPSFNRFTVH
ECLTEAAARKIFTDAGVAHYWDLAVDFSDDQI
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcccttcgagcaagcgcactagggacgaccgcgaccaccgcgatcgagaccac
aagcaccgatcctccagagacgacaagcaccgagactcctccgatcaccaccaccgtcac
cgatctcggcacgagcgctcacacgacgagatagatggaaaccgagaccgagaatcgaag
cgcgagcggtcgtatgacgatgagagggagagggaggggagcagagagagagacaggccc
aagcatcgcgaggcgaaacgtgagccgtcggatgatgatcgcgaggatcgtcatcgcgag
aaatcgtacgatagggacgggtcggtggagaggcgacactcctcgcactcgcacaagagg
aaggagagaggagagagtgaggagagaggtgacggtgtcgagaagaaggctagggtttcg
gagagaaggcggtttgaggatgggaaggaagcaaatggggaagagaggaaagagaagaag
aaggagaggaggaggtttgaggatagagtgaaagaagaagaggaggagaaaagggatagg
ggtttggaaggtgggaagagagtgagtttgagtgaggttaaggttaagtttaaggaagag
gtgagtgatgatgaacattttgatgatgcccagagcaccggcaccgccaatgcgagtggt
tcagttgggaatggtgctgctctggaatcactcaccatggaatccaggagagtgcctgag
acctctgcccctggtcatccccttcctacaaaggtatcttcaatttctaccacaaatgaa
aataagggagttagtattaccagatctcatgaggttcctggaaaatctagtacagatggg
tcatcttcagctgctggaagaagtggaataactcttgatgctttagctaaagctaagaaa
gctttacaaatgcaaaaggaattgtcagagaagctgaagaagattcccatgttgaacaag
ggttctaactcaagctcagatggtacccggcagttgggattgaaggaaggactgaaagca
ccatctattgctgctggaacagggtcaactgcccctacagctgtttcggcaggggcaaca
tcaagttcattaaccttacccatatctgctacaggtcctagtgctcctgctggtctccca
gctatacacaatattgaggcagtaaaacgtgcacaggaacttgctgccaggatggggttt
cgtcaggacccagagtttgctcctcttataaacttgtttccaggtcagatggcagcagat
gtttctgttccgcagaagccaagcaaggcccctgttcttcgccttgatgcacttggtagg
gaggtagatgagcatggaaatgtggtgaatgtgactaaaccaagcaacctaagcacttta
aaggtcaacattaacaaacagaaaaaggacgcatttcagattcttaaacccgagttggat
gttgatccagactcaaatcctcattttgatgaaaggatgggtattaacaaaactaagatt
ttgagacctaagagaatgagtttccagtttgttgaagaaggcaagtggtcaaaagaggct
gagcatattaaattgaagagtcaatttggagaagcacaagcgaaagagcagaaggcaaag
caggcacagctggctaaggcaaaggcagcacctgatattaatccaaatttgatagaggta
gcagagagagttatcaccaaagagaaacctaaagacccaattcctgaaattgagtggtgg
gatgtgcttcttttgcaatctggtgcttatggtgacattactgatggatctgtggctgaa
gataaactgaaaatggagaagatcactatctatgtagaacaccctcgcccaattgagcct
cctgctgagcctgctcctccacctcctcagcccctgaagctaaccaagaaggagcagaag
aaactccgtactcaacgtcgtctggcgagggagaaagataagcaggagatgattagacaa
ggcctaattgagcctccgaagccgaaagttaaaatgagcaatctgatgaaagttcttggc
tccgaagccacccaagatccaactaggcttgaaaaggaaatcaggagtgcagctgctgaa
cgtgagcaagctcacatagacagaaatgttgctcggaaactcactcctgctgagcgccgt
gaaaagaaagagcggaagctttttgatgaggcaaacacactggagtccattgtgtcagtt
taccggatcaatgacctgtcacacccacagacccgcttcaaagttgatgttaatgcccaa
gagaaccgcttgactggatgtgctgtgatttctgatggcattactgttgtggttgttgaa
ggtggaaacaagcccataaagaggtatggaaagcttatgcttaagcgtataaactgggca
tctgctgtaaaggaggaagatgaagatggggatgaaggtgatgataagcctgctaataag
tgtgtcttagtatggcaaggatgtgttgccaaaccgagtttcaatagatttactgttcat
gaatgcctgactgaagccgctgctcggaaaatatttaccgatgctggtgttgctcattac
tgggatctagccgttgacttttcggatgatcaaatataa
DBGET
integrated database retrieval system