KEGG   Corylus avellana (European hazelnut): 132187074
Entry
132187074         CDS       T09426                                 
Name
(RefSeq) protein RDM16
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132187074
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cave03041]
    132187074
Spliceosome [BR:cave03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    132187074
SSDB
Motif
Pfam: PRP3 Prp3_C DUF726
Other DBs
NCBI-GeneID: 132187074
NCBI-ProteinID: XP_059457219
LinkDB
Position
ca7:complement(26484272..26490280)
AA seq 872 aa
MDRPSSKRTRDDRDHRDRDHKHRSSRDDKHRDSSDHHHRHRSRHERSHDEIDGNRDRESK
RERSYDDEREREGSRERDRPKHREAKREPSDDDREDRHREKSYDRDGSVERRHSSHSHKR
KERGESEERGDGVEKKARVSERRRFEDGKEANGEERKEKKKERRRFEDRVKEEEEEKRDR
GLEGGKRVSLSEVKVKFKEEVSDDEHFDDAQSTGTANASGSVGNGAALESLTMESRRVPE
TSAPGHPLPTKVSSISTTNENKGVSITRSHEVPGKSSTDGSSSAAGRSGITLDALAKAKK
ALQMQKELSEKLKKIPMLNKGSNSSSDGTRQLGLKEGLKAPSIAAGTGSTAPTAVSAGAT
SSSLTLPISATGPSAPAGLPAIHNIEAVKRAQELAARMGFRQDPEFAPLINLFPGQMAAD
VSVPQKPSKAPVLRLDALGREVDEHGNVVNVTKPSNLSTLKVNINKQKKDAFQILKPELD
VDPDSNPHFDERMGINKTKILRPKRMSFQFVEEGKWSKEAEHIKLKSQFGEAQAKEQKAK
QAQLAKAKAAPDINPNLIEVAERVITKEKPKDPIPEIEWWDVLLLQSGAYGDITDGSVAE
DKLKMEKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAREKDKQEMIRQ
GLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHIDRNVARKLTPAERR
EKKERKLFDEANTLESIVSVYRINDLSHPQTRFKVDVNAQENRLTGCAVISDGITVVVVE
GGNKPIKRYGKLMLKRINWASAVKEEDEDGDEGDDKPANKCVLVWQGCVAKPSFNRFTVH
ECLTEAAARKIFTDAGVAHYWDLAVDFSDDQI
NT seq 2619 nt   +upstreamnt  +downstreamnt
atggatcgcccttcgagcaagcgcactagggacgaccgcgaccaccgcgatcgagaccac
aagcaccgatcctccagagacgacaagcaccgagactcctccgatcaccaccaccgtcac
cgatctcggcacgagcgctcacacgacgagatagatggaaaccgagaccgagaatcgaag
cgcgagcggtcgtatgacgatgagagggagagggaggggagcagagagagagacaggccc
aagcatcgcgaggcgaaacgtgagccgtcggatgatgatcgcgaggatcgtcatcgcgag
aaatcgtacgatagggacgggtcggtggagaggcgacactcctcgcactcgcacaagagg
aaggagagaggagagagtgaggagagaggtgacggtgtcgagaagaaggctagggtttcg
gagagaaggcggtttgaggatgggaaggaagcaaatggggaagagaggaaagagaagaag
aaggagaggaggaggtttgaggatagagtgaaagaagaagaggaggagaaaagggatagg
ggtttggaaggtgggaagagagtgagtttgagtgaggttaaggttaagtttaaggaagag
gtgagtgatgatgaacattttgatgatgcccagagcaccggcaccgccaatgcgagtggt
tcagttgggaatggtgctgctctggaatcactcaccatggaatccaggagagtgcctgag
acctctgcccctggtcatccccttcctacaaaggtatcttcaatttctaccacaaatgaa
aataagggagttagtattaccagatctcatgaggttcctggaaaatctagtacagatggg
tcatcttcagctgctggaagaagtggaataactcttgatgctttagctaaagctaagaaa
gctttacaaatgcaaaaggaattgtcagagaagctgaagaagattcccatgttgaacaag
ggttctaactcaagctcagatggtacccggcagttgggattgaaggaaggactgaaagca
ccatctattgctgctggaacagggtcaactgcccctacagctgtttcggcaggggcaaca
tcaagttcattaaccttacccatatctgctacaggtcctagtgctcctgctggtctccca
gctatacacaatattgaggcagtaaaacgtgcacaggaacttgctgccaggatggggttt
cgtcaggacccagagtttgctcctcttataaacttgtttccaggtcagatggcagcagat
gtttctgttccgcagaagccaagcaaggcccctgttcttcgccttgatgcacttggtagg
gaggtagatgagcatggaaatgtggtgaatgtgactaaaccaagcaacctaagcacttta
aaggtcaacattaacaaacagaaaaaggacgcatttcagattcttaaacccgagttggat
gttgatccagactcaaatcctcattttgatgaaaggatgggtattaacaaaactaagatt
ttgagacctaagagaatgagtttccagtttgttgaagaaggcaagtggtcaaaagaggct
gagcatattaaattgaagagtcaatttggagaagcacaagcgaaagagcagaaggcaaag
caggcacagctggctaaggcaaaggcagcacctgatattaatccaaatttgatagaggta
gcagagagagttatcaccaaagagaaacctaaagacccaattcctgaaattgagtggtgg
gatgtgcttcttttgcaatctggtgcttatggtgacattactgatggatctgtggctgaa
gataaactgaaaatggagaagatcactatctatgtagaacaccctcgcccaattgagcct
cctgctgagcctgctcctccacctcctcagcccctgaagctaaccaagaaggagcagaag
aaactccgtactcaacgtcgtctggcgagggagaaagataagcaggagatgattagacaa
ggcctaattgagcctccgaagccgaaagttaaaatgagcaatctgatgaaagttcttggc
tccgaagccacccaagatccaactaggcttgaaaaggaaatcaggagtgcagctgctgaa
cgtgagcaagctcacatagacagaaatgttgctcggaaactcactcctgctgagcgccgt
gaaaagaaagagcggaagctttttgatgaggcaaacacactggagtccattgtgtcagtt
taccggatcaatgacctgtcacacccacagacccgcttcaaagttgatgttaatgcccaa
gagaaccgcttgactggatgtgctgtgatttctgatggcattactgttgtggttgttgaa
ggtggaaacaagcccataaagaggtatggaaagcttatgcttaagcgtataaactgggca
tctgctgtaaaggaggaagatgaagatggggatgaaggtgatgataagcctgctaataag
tgtgtcttagtatggcaaggatgtgttgccaaaccgagtttcaatagatttactgttcat
gaatgcctgactgaagccgctgctcggaaaatatttaccgatgctggtgttgctcattac
tgggatctagccgttgacttttcggatgatcaaatataa

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