Corylus avellana (European hazelnut): 132187093
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Entry
132187093 CDS
T09426
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave00040
Pentose and glucuronate interconversions
cave01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132187093
Enzymes [BR:
cave01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132187093
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
132187093
NCBI-ProteinID:
XP_059457249
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Position
ca7:complement(24051851..24057250)
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AA seq
505 aa
AA seq
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MLIPTTCILLLCFLLSSRPFFTKATFNLTLPHQHPDPEAVVLDVQRRVNVSLSRRQMLSL
QAKDQASPCLTGNPIDDCWACDPDWQSNRQKLADCGIGFGHNALGGKGGQIYVVTDSSDN
DPANPVPGTLRHAVIQEEPLWIVFSAAMTIKLKHELIFNSYKTVDGRGANVHIVGNGCIT
LQYVSNVIIHNIHVHHCKPSGNTDIRVSPTHVGWRGRSDGDGISIFGAHQIWIDHCSLSY
CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDRYVLDSGMQVTIAFNHFGDALVQRM
PRCRRGYIHVVNNDFTQWEMYAIGGSANPTINSQGNRYTAPTDQNAKEVTKRVDTDEGQW
TNWNWRTDGDIMVNGAFFVPSGAGLSAQYAKASSVEPKAAGLIEQLTMHAGVLGGPRESG
ETVSSYPGPGSIGGGTSTGTTYTGSPGTTGGDADFFGMIFRGAAAPLTPSSTSTFLSLLI
IVLILYSTTNHHVLLSSTLLLLLPF
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcctaccacctgcattctcttattgtgtttcctcttgagctctcgccccttc
ttcaccaaagccaccttcaatctcacgctccctcaccaacaccccgaccctgaagctgtt
gttcttgatgtacaaaggcgcgtcaatgtctctctctcccgaagacaaatgctctctctc
caagcaaaggaccaagcttccccatgcctcaccggcaaccccatcgacgactgctgggca
tgcgacccggactggcagagcaaccgccaaaagctcgccgactgcggcatcgggttcggg
cacaacgccctcggcggcaaaggcggtcagatctacgtcgtcaccgactcctccgacaat
gaccccgccaaccctgtccccggtaccctccgccacgccgtcattcaagaagaacccctc
tggatagtattctctgcggccatgaccataaagctgaagcatgagctgatcttcaacagc
tacaagaccgtcgacggacgcggcgctaacgttcacatcgtgggcaacggctgcatcaca
ctgcagtacgtatccaacgtcatcatccacaacatccacgtgcaccactgcaaaccgtcg
ggcaacacagacatccgggtctccccgacgcacgtcgggtggaggggcagatccgacggc
gacggcatctccatcttcggcgcccatcagatctggatcgaccattgctccttatcttac
tgcacggacggcctgatcgacgcgataatggggtccaccgggataaccatctccaataat
tatttctcgcatcacgacgaggtgatgctgctgggccatgatgatcgatacgtgttggac
tcggggatgcaggtcactatagcgtttaatcacttcggtgacgcactggtgcagcgtatg
cctcggtgcagacgcggctacatacacgtggtgaacaacgatttcacgcagtgggagatg
tacgccataggcggtagcgctaatcctaccatcaatagtcaggggaatcggtatactgca
ccaacggaccagaatgctaaagaggtgacgaagcgcgtggacacggacgaggggcagtgg
acgaactggaactggaggacggacggggacataatggtaaatggggcgttcttcgtgccc
tcaggagctggcctgagcgcccaatacgccaaggcctcgagcgtggagcccaaagccgct
ggcctcatcgaacagctcaccatgcacgccggtgtcctcggtgggcccagggagagcggt
gagaccgtctcgtcgtacccagggccaggatccatcggtggtggaaccagcacgggcacc
acctacaccggcagtccagggaccaccggcggtgatgccgacttttttggaatgatattc
agaggcgccgcggcgccactcaccccatcttctacatcaacattcttgtcccttttaatt
attgttttaattttgtactctaccaccaaccatcatgtcctattatcatcaacattatta
ttattgttacccttttag
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