Corylus avellana (European hazelnut): 132187138
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Entry
132187138 CDS
T09426
Name
(RefSeq) small RNA degrading nuclease 1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132187138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cave03009
]
132187138
Ribosome biogenesis [BR:
cave03009
]
Eukaryotic type
Pre-60S particles
RNases
132187138
SSDB
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Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DUF4094
UPF0242
Motif
Other DBs
NCBI-GeneID:
132187138
NCBI-ProteinID:
XP_059457318
UniProt:
A0ACM5LTX7
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All DBs
Position
ca7
Genome browser
AA seq
521 aa
AA seq
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MDELFDTAEKKVLVEMVKLAQKHGMKGTNGDWKEFLNVHDKKLGACLSDPTRRSNHVLAA
FLKSFAKEDDLKFFAKMMQCHVKRDMVEQFTKNSPDDEIPEQRLVRLTMEHPQYPLDYSF
PSNDEEWVVTKLSTKSKVMSSNVILAVDCEMVLCEDGTEALVRVCVVDRNLQVKLDEHVN
PNKAVVDYRTDITGVSATDLEGVSCSLADVQKSLKKLLSNGTILVGHSLNNDLRALKLDH
ARVIDTSLIFKYSDARINRKPSLNYLCKSVLGYEVRRKGAPHNCLDDACAAMKLVLAKIE
HGVDNVIPLVPEDVPESEMAKLLLHRIPNNVPTEELHKVLPGDFRIEPKSSKKVQGGKYS
AFAIFKNPKEAHQAYETVTGGQEKDSMGRPQKLVKLKLTTGLIASLFVRKMTYDDSLSQI
SSKKRALQAEETSGASKKLKTNEKIEEDTSNQCCDHLEEIGRLKQELSKREMADSNHCCD
HLKEMGRLKEELSKRDFQITTLDKTIAGLKKKLKSRHGKHP
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctcttcgataccgcagagaaaaaggtccttgttgagatggtgaagttggcc
cagaaacatggaatgaagggtacgaatggagactggaaggagtttttgaatgttcacgat
aaaaagcttggagcttgcttgagtgatccaacaaggaggtcaaatcatgtgttggctgct
tttctcaagagttttgctaaagaggatgatttgaagttttttgctaaaatgatgcaatgc
catgttaagcgggacatggtggagcaatttacaaagaattccccagatgatgaaatcccc
gagcagagactggttcgtttaacaatggaacacccacagtacccgttggattattcattc
ccatcaaatgatgaggaatgggtggttacaaagctcagtacaaaatccaaggttatgagc
tcaaatgtgatacttgctgttgattgtgagatggttctctgtgaagatggcactgaagct
ttggtgagagtttgtgtcgtggatcgtaatttacaggtgaaacttgatgaacatgtaaat
cccaataaagcagttgtggattatagaactgatataacaggagtcagtgcaacagatttg
gaaggagttagttgttcattggcagatgtgcagaaatccctgaagaagctgttgtcaaat
ggtactattctagtgggccacagcttaaataatgacctgcgagcactgaaattagatcat
gctagagtgattgacacctcacttatcttcaaatattcggatgcacggatcaatagaaaa
ccatctctgaattatttgtgtaagtctgtgttgggctatgaagttcggaggaagggtgct
ccgcacaattgtctagatgatgcatgtgctgcaatgaaacttgttcttgctaagatagag
catggtgttgataatgttattcccttggttccagaggatgtacctgaatctgaaatggca
aagctacttctccacaggataccaaacaatgtgcctactgaagaattacataaagtcctt
cctggggattttagaattgaaccaaagtcatctaagaaagtgcaaggaggaaaatattct
gcgtttgccatatttaagaatccaaaagaggcacatcaagcatatgaaactgtcacaggg
ggccaagaaaaggactcgatgggaaggccacagaaacttgtcaaactaaagctcaccaca
ggcttaattgcaagtctatttgtccgtaaaatgacatatgatgattcccttagccaaata
tcatccaagaagagagctctccaagctgaggagacctcaggtgcatccaaaaaattaaag
accaatgagaaaattgaagaggatacctcgaatcagtgttgtgaccacttggaagagatt
ggaagactaaagcaagagctgagcaaaagggagatggcagattcaaatcactgctgtgat
catttgaaagagatgggaagattgaaggaagaattgagcaaaagggattttcaaatcact
accctggataagacgatagctggacttaaaaaaaaactaaaatctaggcatggtaaacat
ccctag
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