KEGG   Corylus avellana (European hazelnut): 132187438
Entry
132187438         CDS       T09426                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03020  RNA polymerase
cave03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132187438
  09124 Replication and repair
   03420 Nucleotide excision repair
    132187438
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cave03021]
    132187438
   03019 Messenger RNA biogenesis [BR:cave03019]
    132187438
   03400 DNA repair and recombination proteins [BR:cave03400]
    132187438
Transcription machinery [BR:cave03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     132187438
Messenger RNA biogenesis [BR:cave03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     132187438
DNA repair and recombination proteins [BR:cave03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132187438
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 Vg_Tdu
Other DBs
NCBI-GeneID: 132187438
NCBI-ProteinID: XP_059457735
LinkDB
Position
ca1:complement(3596348..3599193)
AA seq 176 aa
MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
IGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPSAG
NT seq 531 nt   +upstreamnt  +downstreamnt
atgttcttccacatagtactggagcggaacatgcagctacacccgcgccacttcggccgc
aacctccgcgagaacctcgtctccaagctcatgaaagatgtcgagggcacctgcagcggt
agacatgggtttgtggtggcaataacgggcatagagaacattggaaaagggttgattcgt
gatgggacagggtttgtgacatttccggtgaagtatcaatgtgttgtgttcagaccattt
aaaggggagattttagaagctgttgtaactatggtgaacaagatgggatttttcgccgaa
gctggacctgttcaaatttttgtttcaaaccatttgataccggatgatatggaattccaa
attggagatatgccaaattatactacttcggatggatcagttaaaatacagaaggatagt
gaagtgcgcttgaagataattgggactcgagttgatgctacagaaattttctgcattggt
accataaaagatgatttcttgggtgtgataaacgatccttcagccggatag

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