Corylus avellana (European hazelnut): 132187479
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Entry
132187479 CDS
T09426
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03013
Nucleocytoplasmic transport
cave03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132187479
03015 mRNA surveillance pathway
132187479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132187479
Enzymes [BR:
cave01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132187479
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132187479
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CdhD
Motif
Other DBs
NCBI-GeneID:
132187479
NCBI-ProteinID:
XP_059457784
UniProt:
A0ACM5LRD5
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All DBs
Position
ca7
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AA seq
493 aa
AA seq
DB search
MADAVEDTTRAPPQNALPENALPKRWGDEEDDTVEEPSASSSNSEEKAASELKVEALTIN
DDESKINKFLDEPQDSNITAVTDTLYESASSFEDLNLSPELLKGLYVEMKFQKPSKIQGI
SLPMILNPPHKDLIAQAHNGSGKTTCFVLGMLSRVDPNLKAPQALCVCPTRELAIQNVEV
LRKMGQYTGITSECAVPMDIKHYVPISKQPPISAQVVIGTPGTIKKWMSNKKLGVTQIKI
LVFDEADHMLAEDGFKDDSLRIKKDIERLSSHCQVLLFSATFNENVKNFVSRIVKDYNQL
FVKKEELSLEAVKQYKVRCPDERTKTLVIKDRILELGENLGQTIIFVRTRNSASILHKAL
VDLGYAVTTIQGAASAEDRDKIVQEFKNNLTKVLISTDLLARGFDQQQVNLVINYDLPVK
YETSEPDYEVYLHRIGRAGRFGRKGAVFNLLCGDRDEMLMSKIEHYFGSKVAEVKSWDSD
EDFNNALKAAGLL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgccgtagaagatacaacccgagcgccgccccagaatgcactgccggagaac
gctctgccgaagcggtggggagacgaagaggatgatactgtggaagagccgagtgcatct
tcttcgaattcagaggagaaagccgcctcggagctcaaggttgaggccttgaccatcaat
gacgacgagagcaaaatcaacaagttcctcgatgagccccaggactctaacatcacagcg
gttactgatacactgtatgaatctgctagtagttttgaggatttaaacttgtcaccagag
ttgctaaagggcttgtatgtggagatgaagttccagaagcccagcaaaatccaaggaatt
agtttaccgatgatattgaatcctccacataaagatttgatagctcaggcacataatggc
tctggtaagactacttgttttgtgcttgggatgttgagtcgtgttgatcccaacctgaag
gctcctcaggcactttgtgtctgccccacaagagagctggctattcagaacgtggaagtt
cttcggaagatggggcagtacacaggtataacttcagagtgtgctgtgccaatggatatc
aaacattatgtgccaatatcaaaacaaccgccgatctcagcacaagtagtcataggaact
cctggtacgatcaagaaatggatgtcaaataagaaattgggagtgactcaaatcaagatt
cttgtttttgatgaggctgatcacatgcttgctgaggacggatttaaggacgattccttg
agaataaagaaggatattgaaagacttagttctcactgccaggttcttctgttttctgct
acgtttaatgaaaatgtcaaaaattttgtatcaaggatagtcaaagactacaatcaactt
tttgtcaagaaggaagaactgtctttagaggctgtgaagcagtacaaagttcgttgtcct
gatgaacgcacgaagactcttgtgattaaagacagaatacttgaattgggagagaacttg
gggcagacaattatatttgtacgtacgcgaaatagtgccagcatattgcataaggcactt
gttgaccttggttatgcagttactaccattcaaggtgctgccagtgcagaagacagagac
aaaatagtccaagagttcaaaaataatctaactaaagttcttatatcaacggatctcctt
gcccgaggctttgaccaacaacaggtcaatctggtcattaactatgatcttccagtgaag
tatgaaacctcggagcctgattatgaggtgtacttgcataggattggaagggcagggcga
tttggccgcaagggagctgtgtttaacttgctatgtggtgatagggatgagatgctcatg
tcaaaaattgagcattattttggctctaaagtcgcagaggtgaagtcctgggatagtgat
gaagatttcaacaatgcccttaaggcggcgggattgttgtga
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