KEGG   Corylus avellana (European hazelnut): 132187611
Entry
132187611         CDS       T09426                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132187611
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cave03019]
    132187611
   03036 Chromosome and associated proteins [BR:cave03036]
    132187611
Messenger RNA biogenesis [BR:cave03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     132187611
Chromosome and associated proteins [BR:cave03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    132187611
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_EML WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_WDR75_1st Beta-prop_RSE1_2nd Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_BBS7
Other DBs
NCBI-GeneID: 132187611
NCBI-ProteinID: XP_059457958
LinkDB
Position
ca7:complement(22546646..22560876)
AA seq 347 aa
MSTFGAASAPNPNPNKSFEVAQPPSDSVSSLSFSPKANYLVATSWDNQVRCWEIMQSGTA
VGSTPKASISHDHPVLCSAWKDDGTAVFSGGCDKQAKMWPLSGGQPVTVAMHDAPIKDIA
WIPEMSLLVTGSWDKTLKYWDTRQSNPVHTQQLPDRCYALTVRHPLMVVGTADRNLIVFN
LQNPQTEYKRITSPLKYQTRCVSAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCHR
DNNEIYSVNSLNFHPVQHTFATAGSDGAFNFWDKDSKQRLKAMARCSQPIPCSTFNNDGS
LFAYATCYDWSKGAENHNPATAKTYIFLHLPQEAEVKSKPRVGAGRK
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgtctacttttggagccgcttcggcgccgaaccctaatccgaacaaatcctttgaggtg
gctcagcctcctagtgactctgtttcaagcctcagtttcagcccgaaggccaattacctg
gttgctacttcctgggataaccaggtaagatgttgggagataatgcagagtgggactgct
gtaggcagtacacccaaggcttcaatatctcatgaccatccggttttgtgctcagcttgg
aaagatgatggaacagctgttttttctggaggctgtgataagcaagcaaaaatgtggcct
ttgtctggtggtcagccagtgactgtggccatgcatgatgcgcccatcaaagatattgct
tggatcccagagatgagcctcttagtcacaggaagttgggacaaaaccctaaagtactgg
gatacaaggcagtcaaatccagtgcatactcaacaactccctgaccgctgttatgcacta
acagtgaggcatcctctgatggttgttggcactgcagatcgaaatttgatagtcttcaac
ctgcagaacccacagactgagtacaagagaatcacttcacctttaaagtatcagacaaga
tgtgtttctgcctttcctgatcaacaaggtttcttggttggctcgatagagggaagggtc
ggtgtacaccaccttgacgattcacagcagagtaaaaactttactttcaaatgccacaga
gataacaatgagatttactctgtcaactctctaaatttccatccagtgcagcacactttt
gcaactgcaggatctgatggtgcttttaatttctgggataaagacagtaaacagagactt
aaggcaatggcaaggtgcagccaacccataccctgcagtactttcaacaacgatggttca
ctatttgcatacgcgacatgctacgactggagtaagggtgcagaaaatcacaatccagca
acagcgaagacctacattttcctgcatctgccacaggaggccgaggttaaaagcaagcca
cgagttggagctggtagaaagtga

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