Corylus avellana (European hazelnut): 132188378
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Entry
132188378 CDS
T09426
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132188378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cave04121
]
132188378
Enzymes [BR:
cave01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132188378
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
132188378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
DUF7567
zf-C3HC4_2
zf-RING_2
FAIM1
Motif
Other DBs
NCBI-GeneID:
132188378
NCBI-ProteinID:
XP_059458793
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All DBs
Position
ca7:complement(5992635..5997435)
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AA seq
314 aa
AA seq
DB search
MESGSIDIVPSPDVMDEDEIHHHHHQFPSISKPHNNNNNSPSTTSVHELLECPVCTNSMY
PPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELRCKYSSLGCPEI
FPYYSKLKHEAVCNFRPYNCPYAGSDCSVVGDIPFLVAHLRDDHKVDMHSGCTFNHRYVK
SNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDARNYTYSLEV
GGNGRKLTWEGNPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ
QNPEGGACIHNLCS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaggtagcattgatatcgtgccatccccggatgtgatggatgaggacgagatc
catcaccatcaccatcagttcccttcgatttccaagcctcacaacaacaacaacaacagt
cccagcaccaccagcgtccatgagcttcttgaatgccctgtatgcactaattcaatgtac
cccccaatccatcagtgccacaatgggcataccctctgttcgacctgtaaaacaagggta
cacaaccggtgtccaacttgtaggcaggagcttggcgacattaggtgtctagcattggag
aaggtagctgaatcacttgaactgcgctgcaaatacagctctcttgggtgccctgagata
ttcccttactatagtaaactcaaacatgaagctgtttgtaacttcagaccatacaactgt
ccatatgctggatcggactgctctgtcgttggagatattccattccttgttgcccactta
agggatgatcacaaggttgatatgcattctggatgcacttttaaccatcgttatgtcaag
tcaaatccccgagaagtagaaaatgctacttggatgttaactgtcttccactgttttggt
cagtacttctgtctccattttgaagccttccagcttggcatggctcctgtttatatggca
ttcctccgtttcatgggtgatgaaaacgacgctagaaactacacctatagcctggaagtt
ggaggaaatggtcgaaaactgacttgggagggcaacccaagaagcgtaagggacagccac
aggaaagttagagatagccatgatggcctcattatacagcggaacatggcacttttcttc
tctggaggggataggaaagagctcaagttgcgtgttacgggccggatatggaaagaacag
cagaacccagaaggcggggcctgcatacacaatctttgtagttag
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