Corylus avellana (European hazelnut): 132188429
Help
Entry
132188429 CDS
T09426
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132188429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cave04121
]
132188429
Enzymes [BR:
cave01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132188429
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
HECT type E3
132188429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Arm
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
132188429
NCBI-ProteinID:
XP_059458861
LinkDB
All DBs
Position
ca1:complement(31925723..31936968)
Genome browser
AA seq
1891 aa
AA seq
DB search
METRSRKRAEATSAAPSSSSSGPTTRSSKRARLLSSAATSSASSAALSLISTRSRSAASV
KANDHPMDPTTESSGSRRRGRNSDNRDNSEKGKEKEHEIRVRDRDRERERDRDNERSLGL
NVDAGCDDDDNDSEGGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSAMGSSSASHQ
SGRLKKILSGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESN
PDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFCARLLTIEYMDLAEQSLQALKKISQE
HPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQ
YHDSKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSNSGGGQASLSAPT
YTGLIRLLSTCASGSPLGSKTLLLLGISGILKDILAGSGISTNASVSPALSRPAEQIFEI
VNLANELLPPLPQGTISLPSSSNLFVKGSVVKKSSAGSSGKQEDTNGNVPEVSAREKLLN
DQPELLQQFGMDLLPVLIQIYGSSVNGPVRHKCLSVIGKLMYFSTAEMIQSLLSVTNISS
FLAGVLAWKDPHVLIPALQIAEILMEKLPGTFSKMFVREGVVHAVDQLILAGNPNPAGSS
SAEKENESGPGTSSRSRRYRRRSGSTNLDGGASEESKNPGSVNIGSPPSSVEIPSVNSNL
RMAVSSCAKAFKDKYFPSEPGSVEVGVTDDLLHLKNLCMKLNAGVDDQKTKAKGKSKASG
SRLGDNSVNKEEYLVGVISEMLSELSKGDGVSTFEFIGSGVIAALLNYFSCGYFSKEKIS
EANLPKLRQQALRRFKSFIAVALPSSIDEASVAPMTILVQKLQNALSSLERFPVVLSHSS
RSSSGSARLSSGLSALSQPFKLRLSRAQGEKSLRDYSSNVVLIDPLASLAAVEEFLWPRV
QRGESGQKSTPSAGNSESGTTPTGAGASSPSTSTPASTARRHSTRSRASVNIGDASKKDP
SQEKSTSSSKGKGKAVLRPAQEEARGPQTRNAARRRAALDKDAQMKPVSGDSTSEDEELD
ISPVEIDDALVIEDDDISDDEDEDHEDVLRDDSLPVCMPDKVHDVKLGDSAEDSFVAPAA
SDSQTNPVSGSSSRAATVKGSDSADFRSGNSYGSRGAMSFAAAAMAGLGSANSRGFRGGR
DRQGRPLYGSLNDPPKLVFTAGGKQLNKHLTIYQAVQRQLVLDEDDDERYAGNDLISSDG
SRLWSDIYTITYQRAESQADRASVGGSSSNTTSKSTKSGSSGSNSDAQLNRLSLLDSILQ
GELPCDLEKSNPTFNILALLRVLEGLNQLAPRLRAQIVSENFAEGKILSLDELSTTGARV
LSEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGL
SRALYRLQQQQGADGHGSSNEREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLE
VEYFGEVGTGLGPTLEFYTLLSHDLQKVGLGMWRTNSSSGKPAMEIDGDQHKNGKPNDAD
GDLVQAPLGLFPRPWPPSADTSDGSQFSKAIEYFRLVGRVMAKALQDGRLLDLPLSTAFY
KLVLGQELDLHDILTYDAELGKTLQELQALVCRKQYLESTSADNSDAVADLCFRGAPIED
LCFDFTLPGYPEYILKPGDENVDIYNLEEYISLIVEATVKTGIMRQMEAFRAGFNQVFDI
TSLLIFTPHELDYLLCGRRELWEADTLADHIKFDHGYTAKSPAVVNLLEILGEFTPEQQR
AFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSSVSNTASNGTGLSEPADDDLPSVMTCAN
YLKLPPYSTKEIMFKKLLYAISEGQGSFDLS
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccggaagcgggcggaggccacgtcagcagcgccctcttcttcctcc
tccggtcccaccacccgttcctccaagcgcgcacgcctactctcatccgccgccacgtca
tctgcctcctctgccgctctctcattgatctccactcgctcccgctctgcagcctctgtc
aaagctaacgaccaccctatggaccccaccaccgagtcctctgggtcccgccgccgtggc
cgaaactcggataacagagacaattccgagaaagggaaggaaaaggagcacgagattagg
gttagggatagggatagggaaagagaaagggatagggataacgagcggagcttggggctg
aacgtcgatgcgggctgcgacgatgatgacaacgatagcgagggcggtggagtcggaatt
cttcaccagaatctgacctcggctagcagcgccctccaggggctgctgcggaagctcggg
gcggggcttgacgatcttttgccgtcatcggcaatgggctcgtcgtcggcctcgcaccag
agcgggcggcttaagaagattctgtctgggctgagggccgacggcgaggaggggcggcag
gtcgaggcactgacgcagctctgtgagatgctttccattggaaccgaggagtcgctgagc
acattttccgtcgattcgttcgtacctgtgctcgttgggttgctgaatcacgagagcaat
cctgatataatgctcctagcggcgagggcgcttacgcatctgtgtgatgtgcttccttcg
tcctgcgccgcggtggtgcattatggcgcggtttcctgcttttgcgcgaggttgcttaca
attgaatatatggacttggctgaacagtctctacaagccttgaagaagatatctcaggaa
cacccgactgcctgtttgcgagctggtgctcttatggctgtgctttcgtatctggatttc
ttttccacaggagttcagcgagtggcattgtctacggctgcaaatatgtgcaagaaactc
ccttcagatgcagctgactttgtgatggaagctgttcccctgttgactaaccttcttcag
tatcacgattcgaaggtgttggagcatgcttctgtttgtttgactcgaattgctgaagca
tttgcatcatctccggataaattagatgaactttgcaatcacggtctggttactcaagct
gcctcgcttatttccaccagcaattctggaggtggacaggcatctctcagtgctcctaca
tacacgggtttaatacgacttctttccacttgtgcaagtggttctcctttgggatccaaa
actttgcttctcctgggtatcagtggtatccttaaagatattttagcggggtcaggcata
tcaactaatgcttcggtttcacctgctttaagtagaccagcggagcagatttttgagatt
gtcaaccttgcaaatgagcttctccctccattgccgcaaggaaccatctccctcccatct
agctccaatttatttgtgaaaggatctgttgttaagaagtcttctgctggcagttctggg
aaacaggaagacacaaatggaaatgttcctgaggtttcagcacgtgagaaattattaaat
gatcagcctgaacttcttcagcaatttggaatggatctccttcccgttctaatacagatc
tatggttctagtgtgaatggccctgttcgtcacaaatgtctttcagtgattggaaaattg
atgtacttcagtactgcagagatgattcagtctttattaagtgtgacaaacatatcaagt
ttcttagcaggtgttttagcatggaaagatccacatgtcttgattcccgcccttcaaatt
gctgagattctgatggaaaagcttcctgggactttctccaagatgtttgttagagaaggt
gtggtacatgctgtggaccaacttattttagctggtaatccaaatcctgcagggtcatct
tctgctgagaaggaaaatgagtctggccctggaacatcatcacgctctaggcgttataga
agacggagtggaagcacgaatctagatggaggtgcttcagaagaatctaagaatcctggt
tcagtaaatattggatcgcctccaagttcggtggaaattccttctgtcaattccaatctt
cgtatggcagtcagttcatgtgctaaagcttttaaagacaagtacttcccttcagagcct
ggttctgttgaagttggagttacagatgatcttctacatttaaagaatctttgcatgaaa
ttgaatgccggtgttgatgaccaaaagactaaagcaaaggggaaatctaaagcttctggg
tctcgcctgggtgataactctgtgaataaggaagagtatctggttggggttatatctgag
atgctatcagaactaagcaaaggagatggtgtatccacttttgagtttattggtagtggt
gtgattgctgctttgctgaactacttctcttgtggctacttttctaaggagaaaatatca
gaagctaacctgcccaaacttcgccaacaagcacttagaagattcaagtcatttattgct
gttgcacttccttccagcattgatgaagcaagtgtagctcctatgactatcttggttcag
aagcttcaaaatgctttgtcctccttggagcgtttccctgttgtgctgagccactcatct
aggtcatctagtggaagtgcacgcctctcctccggactgagtgcattgtctcagcctttt
aagttgcgtctctctagagcccaaggtgaaaaatctctccgcgactattcatctaatgtt
gtactgattgatccattggcaagtttggcagctgttgaagaattcctttggccccgagtt
cagagaggtgaatctggtcagaagtccactccgtctgcagggaactctgagtctggaact
acacctacaggagctggtgcttcttctccatctacttctactcctgcttccactgctcgt
cgtcattctactagatccagagcatctgttaatataggcgatgcatctaaaaaggatcca
tcacaagagaaaagcacaagttcatcgaagggaaagggtaaagctgttttgagacctgct
caagaggaggctagaggacctcaaacaagaaatgctgcccgtagaagggcagcgctggat
aaagatgctcagatgaaacctgttagtggggactctacttctgaggacgaggaattggat
atatctcctgttgagattgatgatgcattggtgattgaagacgatgatatctcagatgat
gaggacgaggaccatgaagatgtgctaagagatgattcccttcctgtttgcatgcctgac
aaagtacacgatgtgaaattgggtgactcagctgaggatagttttgttgctccagcagca
agtgatagccagactaatccagtttctggttctagtagcagagctgctacagttaagggc
tctgattctgctgattttagaagtggaaattcttatggttcaaggggtgcaatgtcattt
gctgctgctgccatggctggtcttggatctgctaatagtagaggttttaggggaggcaga
gataggcaagggcgccctctatatggaagtttgaatgatcctccaaaattagtctttact
gcaggtgggaaacagcttaataagcatttgactatctatcaggctgttcagcggcagctt
gtactggatgaggatgatgatgagaggtacgccggtaatgatctcatatctagtgatgga
agcaggctgtggagtgatatttacactattacataccagcgggcagaaagccaagctgat
agggcttctgttgggggatcaagttctaatactacatcaaaatctaccaaatctggttct
tcgggttctaactctgatgcccagttgaatcgattatcacttctagatagtatcttgcag
ggagagcttccttgtgatctggaaaaatctaatcctactttcaacatactcgcacttttg
cgtgtattagagggtttgaaccagcttgcacctcgtttgagagcccaaatagtttctgag
aattttgccgagggaaaaatcttgagtctggatgagctgagcacaactggtgccagggtt
ctttccgaggaatttatcaacagcaaacttactcccaaattagcaagacaaattcaagat
gcgcttgcactctgcagtggtagccttccttcatggtgctaccagttgacgaaagcatgt
cccttcttgtttccctttgagacccggcgacagtacttttattcaactgcttttgggtta
tctcgtgctttatatcgtcttcagcagcagcagggtgctgatggtcatggatcatcaaat
gaaagagaggtgagggttgggaggttgcagcgccagaaggtccgtgtctctagaaaccgc
attttggattctgctgcaaaagtaatggagatgtattctagccagaaggctgtgcttgag
gtagaatattttggtgaagttggcactggattaggtcccacccttgaattctacacactt
ctaagtcatgatttgcaaaaagttggacttggaatgtggagaacaaattcttcctcaggg
aagcctgcaatggaaattgatggagatcaacataaaaatggaaaacccaatgatgctgat
ggggaccttgtccaagcccctcttgggttgttccctcgtccctggcctccaagtgctgat
acttctgatggtagccagttctctaaagcgattgagtacttccggttggtagggcgtgtg
atggccaaagctcttcaagatggacggctattggacctcccactgtcgacagcattttat
aagcttgtgcttggtcaagagcttgatttgcatgatattcttacttacgatgccgagtta
gggaagactttgcaagaattgcaagcccttgtttgccggaaacaatatctagaatcaact
agtgctgataatagtgatgcagttgcggatttatgttttcgtggagctccaattgaagat
ctctgctttgattttacacttcctggttatccagaatacattttgaaacctggagatgaa
aatgttgatatttataacttggaggagtatatatccttgatagttgaggcaactgtcaag
actggaataatgcggcaaatggaagcatttagagcagggtttaatcaggtctttgacata
acatctttacttatatttactccacatgaattggattacttgctttgtggccgcagagag
ttatgggaggctgatacacttgctgatcatataaaatttgatcatggatacactgccaag
agtccagcagtagttaacttgctagagattttgggagagttcacaccagagcagcagcgg
gccttctgccagtttgtcactggtgcacctaggcttccacctggtggtctggcagtactg
aatccaaaacttacgattgtgagaaagcattcttcgtctgtaagtaacacagcgtcaaac
gggacagggctttcagaaccagccgatgatgacttgccaagtgtcatgacatgtgcaaac
tacctgaagcttcctccttactctacaaaggagattatgttcaagaaactactttatgcg
atcagtgaagggcagggatcttttgatttgtcatga
DBGET
integrated database retrieval system
