Corylus avellana (European hazelnut): 132188517
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Entry
132188517 CDS
T09426
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cave03036
]
132188517
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132188517
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
132188517
NCBI-ProteinID:
XP_059458984
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Position
ca1:40888022..40907727
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AA seq
815 aa
AA seq
DB search
MGLGKTLQAISFLSYLKVHVMSSGPFFVLCPLSVTDGWVSEIVKFSPNLKVLQYVGEKEH
RRSLRRAMYEHVKGQSSSYNGMSLPFDVLLTTYDIALMDQDFLSQIPWQYAVIDEAQRLK
NPSSVLYKLLKERFLMPRRLLMTGTPVQNNLTELWALMHFCMPSIFGTLDQFLSTFKEAE
DPSSGHDAAEVKEQFKSLKYILGAFMLRRTKSRLIACGNLVLPPLTEITTIVPLVSLQKK
VYMSILRKELPKLLAISSGASNHQSLQNIVMQLRKACSHPYLFPGIEPEPFEEGEHLVQA
SGKLMILDQLLQKLHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSVRAEERFSA
IRSFSGQSAKGILNSESEQKGSFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQAL
QRAHRIGQMNHVLSINLVSRHTIEEVIMRRAERKLQLSHNVVGDDMDWEGKEMAGVETGD
LRSIIFGLHIFDPTDVSPENSDELRISEMNAMVDKVLAKRCKQIAGKDDRKFEVNPLDLS
SGSDIVVGGGSTSISLDPGLDEASYLSWVEKLKQASQSGSHPIMESGIRRKAPEKEYLKL
EDARKKAEEKKLSKWEALGYRSLSVKEPISPVTGDVMADSGSLHFVYGDCTHPSKVSPSE
PTVIFSCVDDSGNWGNGGMFDALAKLSASIPDAYQRASEFRDLHLGDLHLIRINEESDEQ
NTGGCPPQWVALAVVQSYNSRRKVPRSKISLSDLECCLSKASFSAAQNSASIHMPRIGYQ
DGSDRSDWYTVERLLRKYGSIYGIKVFVYYYRRST
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgggactaggcaagacattgcaagctatctctttcttgagctatttgaaggttcacgtg
atgtcttctgggccattttttgtattgtgccctctgagcgtaacagatggttgggtatcc
gagatagtaaaattttccccaaacctaaaagttcttcagtatgttggtgagaaagaacat
cgccgcagtctacgcagggcaatgtatgagcatgtaaaaggacagtcctcatcatacaac
ggcatgtcattaccttttgatgtactgttgacaacatatgacatcgcattgatggatcaa
gattttctttctcaaataccatggcagtatgcagtaattgacgaagctcaaagacttaaa
aatccttccagtgttctttataagcttctcaaagagcgttttcttatgccaagaaggttg
ttgatgactggcacacctgtccaaaacaatcttactgaactctgggctttgatgcatttt
tgtatgccttcaatctttgggacactagatcaatttctttccacattcaaggaagctgaa
gatccttcatcaggtcatgatgcagctgaagtaaaggagcagtttaaaagcttaaaatat
atattgggagccttcatgcttcgacgaacaaaatcaaggcttattgcgtgtggaaatcta
gtgctacctcctcttactgagataaccacaatagtgccactcgtcagcctgcaaaagaag
gtttacatgtcaatattaagaaaggagcttcctaaactacttgctatatcttcgggagct
tcaaatcatcaatccttacagaatattgtaatgcagctaagaaaagcatgtagtcatcct
tacctctttcctggtattgagcctgaaccgtttgaagaaggtgaacacctggttcaggcc
agtggtaaactaatgattttggaccaactactccagaagctacatgattctggacaccgt
gtccttctctttgctcagatgacacatacacttgacattttacaggactttctggagtta
agaaaatattcctatgagcgtcttgatggatcagttcgtgctgaggagcgcttctctgca
ataagaagtttcagtggacaatcagctaaagggatcttgaattcagaatctgaacaaaaa
ggctcttttgtttttatgatatccacaagagctgggggagttgggctgaatctggtcgct
gctgatactgttatattctatgagcaagattggaatcctcaagtggacaagcaggctttg
cagagggcacaccggattggtcaaatgaatcatgttttgtcaataaacctagttagcaga
catactatagaggaggttattatgcggagagcagagaggaagttgcagcttagccacaat
gttgtaggggatgatatggactgggaaggcaaggaaatggcaggagttgaaactggtgat
ttgcggtctatcatatttgggttacatatttttgatcctactgacgtcagccctgagaat
tcggatgagttgcggatttctgaaatgaatgctatggttgataaggtacttgcaaagcgc
tgcaaacaaattgcaggcaaggatgataggaaatttgaggtcaatccgttagatctatca
agtggatctgatattgttgtgggaggaggttccacctctatcagtttagatcctggtctt
gatgaggcttcttatctctcctgggttgaaaaactcaagcaggcatcacaatcaggtagt
cacccaataatggagtcagggattagaaggaaagcccctgagaaagagtatctaaaactt
gaggatgcaaggaagaaggcagaggagaagaagttgtctaagtgggaagcccttggatac
cggtcattatcagtaaaagaacctatcagccctgtgactggtgatgtgatggcagattca
ggttctcttcattttgtttatggagattgtacgcatccatcaaaagtttctccgtctgag
ccaactgttatcttcagttgtgttgatgactccggaaactggggcaatggaggaatgttt
gatgcactggccaaactttctgcgagtatccctgatgcatatcaacgagcttctgaattc
agggacctgcatcttggtgatctgcatcttataagaattaatgaggagtcagatgaacag
aatacgggtggttgtcctcctcaatgggtggctttggctgttgtacagtcttacaattct
aggcgtaaagtcccccgcagcaagatctctctttcggacctggaatgttgcttatcaaag
gcatcattctcagcagctcaaaattctgcgtcaatccacatgccacgtattgggtatcaa
gatggatcagatcgttcagattggtacacggtggaacggcttctacgaaaatatggttcc
atatatggcataaaagtttttgtgtattattaccgccgatctacctga
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