Corylus avellana (European hazelnut): 132188556
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Entry
132188556 CDS
T09426
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
132188556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132188556
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
132188556
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
DNA-PKcs_N
Motif
Other DBs
NCBI-GeneID:
132188556
NCBI-ProteinID:
XP_059459032
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Position
ca7:complement(24780785..24788187)
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AA seq
693 aa
AA seq
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MARNKETLLLLLDVGPSMHDVLPEVEKVCSLLVEKKLIYNKSDEVGLILFGTEDTKNELT
REVGGYEHVVVLRDTKVVDGDLVETLQHLPRGTFNGDFLDAIIVGMDILIKRFGKTDKKR
KRICLITNALCPIKDPFQGSKEDQIITIGEQMVQHGMGMESIVVRGRLSENANKRVMDEN
DLLLNIFSKTTCAKLVHVESPISLFGALRTRNISPVTIFRGDLEISSKMKIKVWVYKKTS
EEKFPTLKKYSDKAPATDKFATHEVKVDYEYKNVEGPSRVVPPEERIKGYRYGPQVVPIA
PSEWDAVKFKPEKSVKLLGFTDASNIMRHYYMKDANVFIADPGNTRAVLAVSALARAMKE
KNKVAIVRCVWRNGQGNVVVGVLTPNVSEKENIPDSLYFNVLPFAEDVREFQFPSFNNLP
ASWQPNEQQQEAADNLVKMLDLALPGKEEALQPDFTPNPLLERFYRHLELKSKHPDAAVP
PLDETLKKITEPDPELLSQNKSVIDAFRRIFELKEKPKLKKSNRRFLRENPSGSNKEEGY
SDISAQLLNSSENTSAVKVEKIGDLTPVQDFETMMSRRDGPEWVGKAIKDLKNKIFDMVE
DSHEGDNYSKALECLVALRKGCILEQEPKHFNDFLHHLSNFCREKDLDSFCEFLASKELT
LISKTEAIDSEVSDAEARSFLVKLKPKTEDLSG
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaacaaggagaccttgctattgttgctcgatgtgggtccttcaatgcacgat
gttcttccggaagttgaaaaagtctgctccttgctagtagagaaaaagctcatatacaat
aaatctgatgaagtgggtcttattttatttggaactgaagacacaaaaaatgagctgaca
agggaagtgggtgggtatgaacatgtggtggttttacgagataccaaagttgttgatgga
gatcttgttgaaactttacaacaccttcctcgaggaacttttaatggtgattttcttgat
gctataattgttgggatggatatattgataaaaaggtttggaaaaacagacaaaaaaagg
aaacgcatttgccttataacaaatgcactatgtcctattaaagacccatttcaaggaagc
aaagaagaccaaatcatcaccatcggtgagcaaatggttcaacatggcatgggaatggaa
agtatagttgtgaggggaaggcttagcgagaatgcaaataagagagtaatggatgaaaat
gatcttctattgaatatattttcgaaaacaacatgtgcaaagttggtgcatgttgagagt
ccaatatcattgtttggtgctctaagaactcgaaatatttctccagttacaatattcagg
ggtgatcttgaaatcagctccaaaatgaagattaaggtatgggtttacaagaaaacatca
gaagagaagtttcccactctgaagaaatattctgacaaagcacctgcaactgataaattt
gccacccatgaggtcaaggtagattatgagtacaaaaatgttgaaggtcctagtagagtt
gtacctccagaagaaaggattaaaggatatcgttatggacctcaagtagttcctatagca
ccttctgaatgggatgctgtcaagttcaaaccagagaagagtgtaaaacttctaggattt
actgatgcttccaacataatgcggcactattacatgaaagatgccaatgttttcattgct
gacccgggcaatacaagggcagttcttgcagtttctgccttagcaagagcaatgaaggag
aaaaataaggtggctattgtgcgttgtgtttggagaaatggccaagggaatgttgttgtg
ggggttctgacacccaacgtatctgagaaggagaatattcctgattcgttgtactttaat
gtgcttccctttgctgaggacgttcgagaatttcagttcccctctttcaacaatttacca
gcatcatggcagcctaatgaacagcagcaagaggctgcagataacttggtaaagatgctt
gacctggcactacctggaaaagaggaagctctgcagcctgactttacaccaaatcctctt
ttggagcgtttctatcgtcatcttgagttgaaatcaaagcacccagatgcagctgtacct
cctcttgatgaaaccctcaagaagataactgaacctgatccagaactactttctcaaaac
aagtctgttattgatgcattccgccggatttttgaactcaaagagaaaccaaagctgaag
aaatcaaatcgacgatttttgcgagaaaacccatctggatcgaacaaggaagagggttac
agtgacatttctgctcaattgctcaattccagtgaaaacacatctgctgttaaggttgag
aaaattggggatttgacccctgtccaagattttgaaaccatgatgtcacgtagagatggt
ccagaatgggttggtaaagcaatcaaggacttgaaaaacaaaatatttgatatggtggag
gactcccatgaaggggacaattattctaaagcactggaatgtctagttgcccttcgcaag
ggttgcatccttgagcaggaaccaaaacatttcaacgatttcctgcaccatctttctaac
ttctgccgggagaaggaccttgatagtttctgtgaatttcttgcatccaaagaactcacc
ctgatctccaagacagaagccattgacagtgaagttagtgatgctgaagctagaagtttt
ttggttaaattaaagccaaaaactgaggacttgagtggataa
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