Corylus avellana (European hazelnut): 132189021
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Entry
132189021 CDS
T09426
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132189021
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cave04147
]
132189021
Membrane trafficking [BR:
cave04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
132189021
Exosome [BR:
cave04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132189021
Exosomal proteins of bladder cancer cells
132189021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
BPL_LplA_LipB_2
Motif
Other DBs
NCBI-GeneID:
132189021
NCBI-ProteinID:
XP_059459480
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Position
ca8:complement(23091139..23098088)
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AA seq
1217 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHTKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVAPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVLFHARQDIIVSNSEDRSIRVWDATKRTGLQTFRREHDRFWILSSHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGDSIYYVKDRFLRSFEFSTQRDTQVMSIRRPG
SVSLNQGAKTLSYSPTENAVLICSDLEGGSYELYTTPKDNFGRGETVQEAKRGAGGSAVF
VARNRFAVIDKSTNQVLVKNLKNEIVKKSAIPAVVDAIFYAGTGNLLCRAEDRVVIFDLQ
QRIILGELQTPLVRYVVWSHDMESVALLSKHSIIIANKKLEHQCTLHETIRVKSGAWDES
GVFIYTTLNHIKYCLPNGDTGIIQTLDVPVYITKVSGNTVFCLDRDGKNRAIVIDATEYV
FKLFLLKKRYDQVMSMIRSSDLCGQAMIAYLQQKGFPEVALHFVKDERIRFNLALESGNI
QVAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSK
MLKIAEVKNDVMGQFHNALYLGDIKERVKILENVGHLPLAYIAAKVHGLHDIAELLEAKL
GDNVPSLPEGKSPSLLMPPSPIMCSGDWPLLRVMRGIFEGGLDTVGRNAEEEYEEAADAD
WGEDLDIVDVENIQNGDISAGLEDEDVHEENDEGGWDLEDLDLPPEMDTPKTASNARSSV
FVAPTPGMPVSQIWIQKSSLAAEHAAAGNFDTAMRLLSRQLGIRNFAPLRPFFLDLHMGS
HAYLRAFSSAPVISLAVERGWSESASPNVRGLPALVYKFSQLEEKLKAGYKATTTGKFTE
ALRLFLSILHTIPLIVVESRREVDEVKELIIIVKEYVLGLKMELNRREIKDNPIRQQELA
AYFTHCNLQMPHLRLALLNAMTVCYKAGNLNTAGNFARRLLETNPTIENQAKTARQVLQA
SEKNMKDASQLNYDFRNPFVVCGATYMPIYRGQKDISCPYCSSRFVPSQEGQLCAVCDLA
VVGSDASGLLCSPSQIR
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaagtttgagacgaagagcaatagggtgaagggactgagtttccatactaag
aggccatggatcttggcaagtcttcacagcggtgtgatccagctctgggattacaggatg
ggtactctcattgatcgattcgacgagcacgatggaccagtccgtggtgtccattttcac
aagtctcagccattgttcgtctccgggggggacgattacaagatcaaggtgtggaattac
aagttgcataggtgtttgtttacccttcttggacatcttgattacatccgcactgttcaa
tttcatcatgaatacccatggattgttagtgcgagtgatgaccagactatcaggatatgg
aactggcagtcccgaacttgtatttctgttttgactggacataaccattatgtcatgtgt
gcttccttccatcctaaggaggacttggttgtgtcagcgtccttggatcaaactgttcgt
gtctgggatattggtgctctaaggaagaaaacagttgcccctgcagatgacatcctgcgg
ttgagtcagatgaatacggatctctttggcggggttgatgctgttgtcaagtatgtcttg
gaaggccatgatcggggagttaattgggcatcattccatcccactcttcctctaattgta
tcaggagcagatgatcggcaagtgaaaatttggagaatgaatgatacaaaggcttgggaa
gtagacactttgagagggcacatgaataatgtgtcatgcgttctattccatgctaggcag
gatattattgtgtccaattcagaggataggagtattcgtgtctgggatgctacaaagagg
actggtcttcagacatttcgcagggagcatgacaggttttggattctttcatcacatcct
gaaatgaaccttctggctgctggtcatgatagtggcatgattgttttcaaattagagaga
gagcggcctgctttttctgtgagtggtgattctatttattatgttaaagatcgttttctg
cgttcctttgagttctccactcagagagacactcaggtaatgtcaatccgaaggcctggt
tctgtctccttaaaccaaggggcaaaaacactttcttatagtcctacagaaaatgctgtt
ttgatctgctcggatttagaagggggttcttatgagctatatactacacctaaagataac
tttggtaggggtgagactgtccaggaggcaaaaagaggtgctggaggatcagctgttttt
gtggctcgaaatagatttgcagttattgacaagagcaccaaccaagtgttagtcaaaaac
cttaaaaatgagattgtcaagaagagtgcgattcctgctgttgttgatgcaatattttat
gctggaactggaaacttgctttgcagggcagaggacagagtagttatctttgacctccag
cagaggattattcttggagagcttcaaactcccttagtcaggtatgttgtttggtcacac
gacatggagagtgttgctttgctgagcaaacattctattataatagccaataagaagctc
gagcatcaatgcactcttcatgagacaatccgtgtaaagagtggagcttgggatgaaagt
ggtgtcttcatatataccaccctgaaccacattaaatactgccttcctaatggagatact
ggtatcatccagacccttgatgtcccagtatacataacaaaagtgtctggaaatactgtt
ttttgcctggatcgagatgggaaaaaccgtgccattgttattgatgcaactgaatatgtt
ttcaagttgttccttctgaagaagagatatgaccaggttatgagcatgattaggagctct
gatctctgtgggcaggccatgattgcataccttcagcagaaaggtttcccagaggttgcc
cttcattttgtgaaggatgagagaattcgcttcaacttggcactggagagtggtaacatc
caggttgctgttgcttccgctaaggaaattgacgagaaagatcactggtaccgattggga
gtggaggcccttcgccagggtaatgctggcattgtagaatacgcgtaccagaggacaaag
aactttgagaggctatcattcctatatcttataacagggaatatggataaattgtccaaa
atgcttaaaattgctgaagtcaagaatgatgtaatgggtcagttccacaatgccctatat
ttgggcgatatcaaggagcgtgttaagatcttggagaatgttggccatttacctcttgct
tacatcgcagctaaagttcatgggctgcatgatatcgctgaacttcttgaagctaaactt
ggagataatgttccttctttacctgaggggaaatcaccatctcttttgatgcctccaagt
ccaattatgtgtagtggagattggcctttgttgagggtaatgagaggaatatttgagggt
ggtcttgacactgtgggcaggaatgcagaggaagagtatgaagaggctgcagatgctgac
tggggtgaggatttggatattgttgatgtggaaaacatccagaatggagacatcagcgca
gggttggaggatgaggatgtgcatgaagaaaacgatgagggaggatgggatcttgaagat
cttgatcttccacctgagatggatacacccaaaactgctagcaatgctcgttcttcagta
tttgttgccccaactcctggtatgcctgtaagtcaaatttggatccaaaaatcatctctt
gcagctgagcatgcggcagctggcaattttgatactgcaatgcgtttgttgagccggcag
ctgggtataaggaactttgctcccttgagacccttctttcttgatttacacatgggcagc
catgcctatctgcgtgccttctcttcggcccctgttatttcactggcggtcgaaagggga
tggagtgaatcagctagccctaacgtgaggggcctgcctgctcttgtgtataagttctct
cagcttgaagagaagcttaaggctggttacaaggccacaacaactgggaaatttacggag
gctctacggcttttcctcagtattctccataccattcctctgattgttgtagagtcgagg
agagaggttgatgaagtaaaggaattgattatcattgttaaggaatatgttcttggtttg
aagatggagcttaacaggagggaaattaaagacaacccaattcgtcaacaggagcttgca
gcctacttcacccactgtaaccttcaaatgcctcacttgagactcgccttgttgaatgcc
atgactgtttgctataaggccggtaatctcaacactgcaggaaactttgccaggcgtctg
ttggagaccaacccaaccattgagaaccaagcgaaaactgcccgtcaagtcctgcaggct
tctgaaaagaatatgaaagatgcgtcccagctgaattatgacttcagaaacccatttgta
gtttgtggggcaacatacatgccgatataccgtggacagaaggacatatcatgcccatac
tgcagttcaaggtttgttccatcccaggaagggcagctttgtgctgtttgtgatcttgca
gttgttggatcagatgcatctgggttactttgttccccgtcccagataagatga
DBGET
integrated database retrieval system