KEGG   Corylus avellana (European hazelnut): 132189021
Entry
132189021         CDS       T09426                                 
Name
(RefSeq) coatomer subunit alpha-1-like
  KO
K05236  coatomer subunit alpha
Organism
cave  Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:cave00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cave04131]
    132189021
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cave04147]
    132189021
Membrane trafficking [BR:cave04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    132189021
Exosome [BR:cave04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   132189021
  Exosomal proteins of bladder cancer cells
   132189021
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 TPR_COPA_B EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd BPL_LplA_LipB_2
Other DBs
NCBI-GeneID: 132189021
NCBI-ProteinID: XP_059459480
LinkDB
Position
ca8:complement(23091139..23098088)
AA seq 1217 aa
MLTKFETKSNRVKGLSFHTKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVAPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVLFHARQDIIVSNSEDRSIRVWDATKRTGLQTFRREHDRFWILSSHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGDSIYYVKDRFLRSFEFSTQRDTQVMSIRRPG
SVSLNQGAKTLSYSPTENAVLICSDLEGGSYELYTTPKDNFGRGETVQEAKRGAGGSAVF
VARNRFAVIDKSTNQVLVKNLKNEIVKKSAIPAVVDAIFYAGTGNLLCRAEDRVVIFDLQ
QRIILGELQTPLVRYVVWSHDMESVALLSKHSIIIANKKLEHQCTLHETIRVKSGAWDES
GVFIYTTLNHIKYCLPNGDTGIIQTLDVPVYITKVSGNTVFCLDRDGKNRAIVIDATEYV
FKLFLLKKRYDQVMSMIRSSDLCGQAMIAYLQQKGFPEVALHFVKDERIRFNLALESGNI
QVAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSK
MLKIAEVKNDVMGQFHNALYLGDIKERVKILENVGHLPLAYIAAKVHGLHDIAELLEAKL
GDNVPSLPEGKSPSLLMPPSPIMCSGDWPLLRVMRGIFEGGLDTVGRNAEEEYEEAADAD
WGEDLDIVDVENIQNGDISAGLEDEDVHEENDEGGWDLEDLDLPPEMDTPKTASNARSSV
FVAPTPGMPVSQIWIQKSSLAAEHAAAGNFDTAMRLLSRQLGIRNFAPLRPFFLDLHMGS
HAYLRAFSSAPVISLAVERGWSESASPNVRGLPALVYKFSQLEEKLKAGYKATTTGKFTE
ALRLFLSILHTIPLIVVESRREVDEVKELIIIVKEYVLGLKMELNRREIKDNPIRQQELA
AYFTHCNLQMPHLRLALLNAMTVCYKAGNLNTAGNFARRLLETNPTIENQAKTARQVLQA
SEKNMKDASQLNYDFRNPFVVCGATYMPIYRGQKDISCPYCSSRFVPSQEGQLCAVCDLA
VVGSDASGLLCSPSQIR
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgctgacgaagtttgagacgaagagcaatagggtgaagggactgagtttccatactaag
aggccatggatcttggcaagtcttcacagcggtgtgatccagctctgggattacaggatg
ggtactctcattgatcgattcgacgagcacgatggaccagtccgtggtgtccattttcac
aagtctcagccattgttcgtctccgggggggacgattacaagatcaaggtgtggaattac
aagttgcataggtgtttgtttacccttcttggacatcttgattacatccgcactgttcaa
tttcatcatgaatacccatggattgttagtgcgagtgatgaccagactatcaggatatgg
aactggcagtcccgaacttgtatttctgttttgactggacataaccattatgtcatgtgt
gcttccttccatcctaaggaggacttggttgtgtcagcgtccttggatcaaactgttcgt
gtctgggatattggtgctctaaggaagaaaacagttgcccctgcagatgacatcctgcgg
ttgagtcagatgaatacggatctctttggcggggttgatgctgttgtcaagtatgtcttg
gaaggccatgatcggggagttaattgggcatcattccatcccactcttcctctaattgta
tcaggagcagatgatcggcaagtgaaaatttggagaatgaatgatacaaaggcttgggaa
gtagacactttgagagggcacatgaataatgtgtcatgcgttctattccatgctaggcag
gatattattgtgtccaattcagaggataggagtattcgtgtctgggatgctacaaagagg
actggtcttcagacatttcgcagggagcatgacaggttttggattctttcatcacatcct
gaaatgaaccttctggctgctggtcatgatagtggcatgattgttttcaaattagagaga
gagcggcctgctttttctgtgagtggtgattctatttattatgttaaagatcgttttctg
cgttcctttgagttctccactcagagagacactcaggtaatgtcaatccgaaggcctggt
tctgtctccttaaaccaaggggcaaaaacactttcttatagtcctacagaaaatgctgtt
ttgatctgctcggatttagaagggggttcttatgagctatatactacacctaaagataac
tttggtaggggtgagactgtccaggaggcaaaaagaggtgctggaggatcagctgttttt
gtggctcgaaatagatttgcagttattgacaagagcaccaaccaagtgttagtcaaaaac
cttaaaaatgagattgtcaagaagagtgcgattcctgctgttgttgatgcaatattttat
gctggaactggaaacttgctttgcagggcagaggacagagtagttatctttgacctccag
cagaggattattcttggagagcttcaaactcccttagtcaggtatgttgtttggtcacac
gacatggagagtgttgctttgctgagcaaacattctattataatagccaataagaagctc
gagcatcaatgcactcttcatgagacaatccgtgtaaagagtggagcttgggatgaaagt
ggtgtcttcatatataccaccctgaaccacattaaatactgccttcctaatggagatact
ggtatcatccagacccttgatgtcccagtatacataacaaaagtgtctggaaatactgtt
ttttgcctggatcgagatgggaaaaaccgtgccattgttattgatgcaactgaatatgtt
ttcaagttgttccttctgaagaagagatatgaccaggttatgagcatgattaggagctct
gatctctgtgggcaggccatgattgcataccttcagcagaaaggtttcccagaggttgcc
cttcattttgtgaaggatgagagaattcgcttcaacttggcactggagagtggtaacatc
caggttgctgttgcttccgctaaggaaattgacgagaaagatcactggtaccgattggga
gtggaggcccttcgccagggtaatgctggcattgtagaatacgcgtaccagaggacaaag
aactttgagaggctatcattcctatatcttataacagggaatatggataaattgtccaaa
atgcttaaaattgctgaagtcaagaatgatgtaatgggtcagttccacaatgccctatat
ttgggcgatatcaaggagcgtgttaagatcttggagaatgttggccatttacctcttgct
tacatcgcagctaaagttcatgggctgcatgatatcgctgaacttcttgaagctaaactt
ggagataatgttccttctttacctgaggggaaatcaccatctcttttgatgcctccaagt
ccaattatgtgtagtggagattggcctttgttgagggtaatgagaggaatatttgagggt
ggtcttgacactgtgggcaggaatgcagaggaagagtatgaagaggctgcagatgctgac
tggggtgaggatttggatattgttgatgtggaaaacatccagaatggagacatcagcgca
gggttggaggatgaggatgtgcatgaagaaaacgatgagggaggatgggatcttgaagat
cttgatcttccacctgagatggatacacccaaaactgctagcaatgctcgttcttcagta
tttgttgccccaactcctggtatgcctgtaagtcaaatttggatccaaaaatcatctctt
gcagctgagcatgcggcagctggcaattttgatactgcaatgcgtttgttgagccggcag
ctgggtataaggaactttgctcccttgagacccttctttcttgatttacacatgggcagc
catgcctatctgcgtgccttctcttcggcccctgttatttcactggcggtcgaaagggga
tggagtgaatcagctagccctaacgtgaggggcctgcctgctcttgtgtataagttctct
cagcttgaagagaagcttaaggctggttacaaggccacaacaactgggaaatttacggag
gctctacggcttttcctcagtattctccataccattcctctgattgttgtagagtcgagg
agagaggttgatgaagtaaaggaattgattatcattgttaaggaatatgttcttggtttg
aagatggagcttaacaggagggaaattaaagacaacccaattcgtcaacaggagcttgca
gcctacttcacccactgtaaccttcaaatgcctcacttgagactcgccttgttgaatgcc
atgactgtttgctataaggccggtaatctcaacactgcaggaaactttgccaggcgtctg
ttggagaccaacccaaccattgagaaccaagcgaaaactgcccgtcaagtcctgcaggct
tctgaaaagaatatgaaagatgcgtcccagctgaattatgacttcagaaacccatttgta
gtttgtggggcaacatacatgccgatataccgtggacagaaggacatatcatgcccatac
tgcagttcaaggtttgttccatcccaggaagggcagctttgtgctgtttgtgatcttgca
gttgttggatcagatgcatctgggttactttgttccccgtcccagataagatga

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