Corylus avellana (European hazelnut): 132189138
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Entry
132189138 CDS
T09426
Name
(RefSeq) RNA-binding protein 208-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132189138
03041 Spliceosome [BR:
cave03041
]
132189138
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
132189138
Spliceosome [BR:
cave03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132189138
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_10
RRM_5
RRM_Nup35
RRM_8
Motif
Other DBs
NCBI-GeneID:
132189138
NCBI-ProteinID:
XP_059459666
UniProt:
A0ACM5LXC9
LinkDB
All DBs
Position
ca8:8637899..8653993
Genome browser
AA seq
437 aa
AA seq
DB search
MQQRLKLQQQQQQQALMQQALLQQPHMYHPGVLAAAMSQMEPIPSGNLPPGFDSASCRSV
YVGNIHVNVTEKLLAEVFQTAGPLAGCKLIRKDKSSYGFVDFHDRTSAALAIMNLHGRQL
YGQALKVNWAYTSNQREDTSGHFNVFVGDLSPEVTDATLFACFSVYPSCSDARVMWDHKT
GRSKGYGFVSFRNQLEAQSAINELTGKWLGNRQIRCNWATKGAGANEDKQINDNQNAVVL
TNGSSDGGQENTIEGEAPENNPAYTTVYVGNLSHEVTQPELHCQFHALGAGVIEEVRVQR
DKGFGFIRYNTHEEAASAIQMANGRIIRGKPMKCSWGSKPTPAGTISNPLPPPTQPYQIL
PNASINQGYSSAELLAYQRQLALSQAAASGLSGQALMQMTGQHGMVAASMGSSSGGSQAM
YDGYPNNSSAQQLMYYR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagaggctgaagcttcagcaacaacaacaacagcaagccctgatgcaacaagcc
cttcttcagcagccccacatgtaccaccccggtgtcctcgcggctgccatgtctcagatg
gagcctatcccaagtgggaatctgcctcctggctttgactcagcttcatgccgcagtgtc
tatgtaggaaatattcatgtaaatgtcactgagaagcttcttgctgaagtttttcagact
gctggtcctcttgcaggatgcaagctcatcaggaaagataagtcatcatatggttttgtg
gacttccatgaccggacatctgcagcccttgcaataatgaatttgcatgggcgccaactt
tatggtcaggcacttaaggtgaattgggcatataccagtaaccagcgggaggatacttca
ggacacttcaatgtatttgttggtgatttgagtccagaggttactgatgcaactttattt
gcatgcttctccgtctatcctagttgttctgatgcaagggtcatgtgggatcacaaaact
ggccgctcaaaaggatatggatttgtttctttccgtaatcagctggaggcacaaagtgct
ataaatgaattgactggtaaatggcttggaaataggcaaataagatgcaactgggcaacc
aaaggtgctggtgctaatgaagataagcagatcaatgacaaccaaaatgcagttgtactt
actaatggatcttcagatggaggtcaggagaataccattgagggggaggctcctgaaaac
aatccagcatatactactgtctatgttggaaacctctctcatgaggtaactcaacctgaa
ctccactgtcagtttcatgctcttggggctggggttatagaggaagtgcgtgtccagaga
gataaaggatttggatttattagatacaacacgcatgaagaagcagcctcggccattcag
atggctaatggtaggataattcgtggcaaacccatgaagtgctcatggggcagcaagcca
actcctgccgggaccatttcaaatccgttaccgcctccaacccaaccatatcaaatcctt
ccaaatgcaagcataaaccaaggctattcttcagctgagttgttggcttatcagcgccaa
cttgccttaagtcaggctgctgcatctggcctctcaggtcaagctcttatgcagatgact
ggacagcatggcatggttgctgcttccatgggatccagctctgggggatcccaggccatg
tatgatggatatccaaacaattcatccgcccaacagctcatgtattatcgttga
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