Corylus avellana (European hazelnut): 132189183
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Entry
132189183 CDS
T09426
Name
(RefSeq) protein ALTERED SEED GERMINATION 2
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cave04121
]
132189183
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132189183
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
132189183
NCBI-ProteinID:
XP_059459761
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Position
ca8:20925602..20940880
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AA seq
763 aa
AA seq
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MESFGFHDGNIYDRLETRRFDVGRDVNHSLQMHSSMIRRLSLEKVMEGHQGCVNAVAWNS
KGSLLISGSDDTRLNIWSYSSRKLLHSIETGHSANIFCTKFVPETSDELVVSGAGDAEVR
LFNLSRLSGRGSDDNVIPPSALYQCHTRRVKKLAVEVGNPNVVWSASEDGTLRQHDFREG
TSCPPAGSSRQECRNVLLDLRCGAKRSLSDPPKQILALKSCDISSTRPHLLLVGGSDSFA
RLYDRRMLPPLSSCQNRMSPPPCVNYFCPMHLSERGRTSVHLTHVTFSPMGEEVLLSYSG
EHVYLMDVNNASRSAMQYTSGDVSKLMSFTPILNGAELQSPVSNILPSCHTRKGNVGTTL
EKCRKLIKIAEKSLEEATNCFYGIEACNEILDGCCRDIEPKLKHGCLCLRAALLLKRKWK
NDAHMAIRDCYNAQRIDNSSFRALCHMSEALSQLGKHKDALDFAIAAQYLAPSNSKVAER
VENVKKDLAAVEAEKNNKANDGVPRSELRGGKILSLSDILYRSEANSDASQDGPRSERED
SDYDEEVELDFETSISGDEGHDVESNILHGSLNVRFHRRGDSPRESAGANGTCGSPSSSS
QNDRISYQPEPVIDMKQRYVGHCNVGTDIKQASFLGQKGEYVASGSDDGRWFIWEKKTGR
LIKMLLGDDAVVNCVQCHPFDSVVATSGIDNTIKIWTPSAPVPSIVAGGAERPETADVLV
TMENNQRKLCRNREAFLPFEILERFRMHEFNEGTFHPFECTQS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtttggtttccacgacggaaacatctacgataggctcgagacccgtcgcttc
gacgttggccgagatgttaatcacagtttacagatgcactcatcaatgatacggaggctc
tcccttgaaaaagtaatggaggggcatcaaggttgtgttaatgctgtggcttggaattcc
aaaggttctcttttgatatctggatcagatgacacaaggcttaatatttggagctactct
agccggaagcttttgcattctatagagacggggcattctgcaaacatattctgtacaaag
tttgtgcctgaaacctctgatgagcttgtagtctctggagctggagatgcagaagtgcgg
ttatttaatttgtctcgcttaagtgggagaggatcagatgataatgttattcctccatct
gccctgtatcagtgtcacactagaagagtaaaaaaattagctgttgaagttggaaacccc
aatgtggtgtggagtgctagtgaagatggaactttgagacagcatgattttcgagaggga
acatcttgtcctccagctggatcttctcgtcaagaatgtcgcaatgttctacttgacttg
cggtgtggagcaaagaggtcactttcggatcctcctaaacaaattcttgctctaaaatct
tgcgatatcagttccactagacctcatttgctccttgttggtgggagcgattcatttgca
cgtttatatgatagaaggatgctgccaccactgtcctcttgtcagaataggatgtcacca
cctccttgtgttaactatttctgcccgatgcatctctctgagcgagggcgtacaagcgtg
cacctcactcatgttacatttagtccaatgggagaagaggttctccttagttatagtgga
gagcatgtgtacctgatggatgtaaataatgctagcaggagcgctatgcaatatacttca
ggagatgtttcaaagctgatgagcttcacgcctatactcaatggggcagaattgcagtca
ccagtgtccaatatcctcccaagctgtcatactagaaaaggcaatgttggcacaacgctt
gaaaagtgcaggaaactaattaaaattgcggaaaaatccttagaggaggcaacaaattgc
ttctatggaattgaggcttgcaatgagattttggatggatgttgtcgtgacattgagccc
aagctaaagcatggatgtctatgtctacgtgctgctttattgctcaagcggaagtggaaa
aatgatgctcatatggctataagagattgctacaatgcccagagaattgataattcctcg
tttcgagcactttgccatatgtctgaagctctatcgcagttaggcaaacataaagacgca
ctagacttcgccattgcagcccaatatttggccccgtcaaattctaaagtggcagaaaga
gtggagaatgtcaaaaaagatcttgctgcagttgaagctgaaaaaaataataaagcaaat
gatggagtgccaaggtctgaattgagaggtggaaaaatactctcattaagtgatatactc
taccgatcagaggctaatagtgatgcttcgcaagacggaccaagatctgaaagagaagat
tctgattacgatgaggaagtggagttggactttgaaacttcaatatctggcgatgaaggc
catgatgttgaatcaaacattcttcatgggagtttaaatgtgagatttcatcgaaggggt
gattcaccaagagaaagtgctggcgcaaatggaacatgtggatcaccttcttcatcatca
caaaatgacaggatatcttatcagcctgagccagtaattgatatgaagcagagatacgtt
ggtcactgtaatgttggaactgacataaaacaggccagttttcttggccagaaaggtgag
tatgttgcaagtggaagtgatgatgggagatggtttatctgggaaaagaaaaccggtaga
ctgataaaaatgcttcttggagatgatgctgttgtgaactgcgtccagtgccatccattt
gattctgttgtggcaactagtgggattgacaacacgataaagatatggactccaagtgct
cctgttccatcaattgtagcaggtggagcagaacgaccagaaactgctgatgtgctggtc
accatggaaaacaatcaacgcaaattatgccgtaatcgtgaagctttcctgcctttcgaa
attcttgagcgatttcgaatgcatgagtttaatgaaggtacatttcatccgtttgagtgt
actcagagctaa
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