Corylus avellana (European hazelnut): 132189270
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Entry
132189270 CDS
T09426
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
132189270
Enzymes [BR:
cave01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
132189270
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
132189270
NCBI-ProteinID:
XP_059459914
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Position
ca8:complement(22272122..22281346)
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AA seq
640 aa
AA seq
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MSAPRVHLHIQDHYVVMDNGIVQVTLSNPGGIVTGIRYNGYDNLLEVLNKESNRGYWDLV
WSAPGSKGIFDVISGTIFRVIVKNEDQVELSFTRMWDPTLEGKFVPLNIDKRFIMLRGSS
GFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFRYMAIADDRQRYMPQPDDRCSGKCQIL
AYPEAVLLVNPTMPDHKGEVDDKYQYSCDNKDIKVHGWISSIPHVGFWQITPSDEFRSGG
PLKQSLTSHVGPTTLAMFLSAHYAGQDLVPKFRAGEPWKKVFGPVFIYLNSASIGDDPFW
LWEDAKIQMTNEVQSWPYSFPASEDFQKADQRGNVNGRLLVSDRYTCKDYIPANGAYVGL
APPGDNGSWQRECKDYQFWVRADEGGYFSITNIRTGDYNLYAWVPGFIGDYRCDIAITIT
SGSYIEMGDLVYEPPRDGPTLWEIGIPDRSAAEFFVPDPDPKYINKLYVNHPDRFRHYGL
WGRYAELYPDTDLVYTVGVSDYSKDWFFAQVPRKKEDDTHQGTTWQIKFKLNNVDRRNAY
KLRVAIASATLAEMQVRINDPNAKRPLFTSGLIGRDNSIARHGIRGLYWLYNVNVPGAQL
VEGDNTIYLTQPRSTSPFQGIMYDYIRLEGPPSSNVKDEL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctccacgggtgcatttgcatattcaagatcattatgtggtgatggataatggc
atagtgcaagtcacattatcaaacccaggtggaattgttactggaatacgatataatggc
tacgacaatttgcttgaagttcttaataaggaatctaacagagggtattgggaccttgtc
tggagtgcaccaggaagcaagggaatatttgatgtgattagcggtacaatttttagggtt
atagtgaaaaacgaggaccaggttgagctttcatttacaagaatgtgggatcccacactg
gagggcaagtttgttcccctgaatatagacaaaaggtttataatgcttcgtggttcctca
gggttttattcttatgccatttatgagcacttgaaggattggcccgattttgacattggt
gaaaccaggatcactttcaagctcagaaaagacaagtttcgctacatggccatagcagat
gataggcaaagatacatgcctcagcctgatgaccggtgctcaggaaaatgccaaatcctg
gcctaccctgaagctgtccttctcgtcaatcccacaatgccagatcacaagggagaggtg
gatgacaaataccagtactcctgtgacaacaaagatattaaggtacatgggtggatatct
agtatcccacatgtcggattttggcaaatcacacctagcgatgagttccgatctggtggg
cccctcaaacaaagtctaacatcacatgttggccccaccacccttgcgatgtttcttagt
gctcattatgccggacaagacctggtgccgaaattcagagctggtgagccatggaagaag
gtttttggcccagtatttatctatcttaattctgcatctattggagatgatccgttttgg
ctatgggaggatgctaaaatacagatgacaaacgaagtccaaagctggccttatagtttt
ccagcttctgaggatttccaaaaggctgatcaacgtggtaatgttaatggtagactactt
gtctcagataggtatacttgcaaagattatataccagcaaatggtgcttatgttggcttg
gccccaccaggagacaatggatcatggcaaagagaatgcaaggactatcaattttgggtg
agagcagatgagggaggctatttttccatcaccaacattcgtaccggtgactataacctc
tacgcgtgggtccctggctttataggagattaccgatgcgatattgccattaccataacc
tcaggttcttatattgaaatgggtgatcttgtatatgaacctcctagagatggaccaaca
ttgtgggaaataggcatccctgatcgttctgctgcagagttttttgttcccgatcccgat
ccaaagtacattaataaactttatgtcaatcatcctgacaggtttaggcattacggattg
tggggtaggtacgcagaactatatcctgatacagacttagtgtacactgtcggtgttagc
gattatagtaaagattggttctttgctcaggttcccaggaagaaagaagatgacacacat
caaggaacaacttggcaaatcaagttcaaacttaataatgttgatcggagaaatgcgtac
aaactgcgagtggctattgcgtctgcaactctggctgaaatgcaggtgcggattaatgat
ccgaatgcaaagcgacctctatttacaagtggattaatagggagggacaattcaattgcc
agacatggaattcgtgggctctactggctatacaacgtgaatgtaccaggtgctcagctt
gttgaaggagataataccatctatttgacacaaccaagaagcaccagccccttccaggga
attatgtacgactatattcgtttagaaggcccgccatcttctaatgtcaaagatgaactt
tga
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