Corylus avellana (European hazelnut): 132189330
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Entry
132189330 CDS
T09426
Name
(RefSeq) uncharacterized protein LOC132189330 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132189330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132189330
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132189330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
Mg_chelatase
cobW
Motif
Other DBs
NCBI-GeneID:
132189330
NCBI-ProteinID:
XP_059460006
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Position
ca8:7263398..7274181
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AA seq
815 aa
AA seq
DB search
MPRKVSYGIDYDEDYDDYEDYDYDNDHDFDVEDDGKPPQSKQGTTKRGIWSCSICTYDND
ESFSACDICGVLRNPLINAGTNRDKQTVEGMCKDSGASKMATSLFASLPQRIPETDVLFQ
KQNDVFVKEEGNNSHRHMNIQGQFHEFHKAFSTCSHHHVNIGPHMSENRMWIYRTRINIP
LVASFKFDVPSPDDLVSNGLRSAKMGSKVNSADLKSSRVSSSITEKNGLLNTKASAEKLD
ISSSLMRKGRQDTFDDSNHSKNRAHNIQSSVKVSDSSLETMPKHYNVDASNNSKNDRGNK
LSSDKCSDNSPALNLKGRHDRIDESSSSSVSGGKPESLTNSLNKRALGVGSGFSNNVNAT
VTHSKEQYKPEKWMLPDQAEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKY
EKEAKIQGKGSFAYAWALDESTEERERGITMTVGVAYFDSKKYHVVVLDSPGHKDFVPNM
ISGATQADAAILVIDASFGAFEAGMDNAKGQTREHAQLIRSFGVDQIIVVINKMDAVDYS
KERFDLIKQQLGTFLRTCGFRDSLISWIPLSAMENQNLVAAPSDVRLLSWYRGPYLLDAI
DSLQPPTRDFSKPLVMPICDVIKLPTMGQVCACGKLEAGALRSGSKVLVMPSGNVGSVRS
LERDSQACTLARAGDNVTVGLQGIDGGHVMAGGVLCHPDFPVAISKHLELKVLVLDVTTP
ILIGSQLEFHVHHAKEAARVVRIVSLLDPKTGKVTKKAPRCLTAKQSAVIEVALQGPVCV
DEFSSCRALGRASLRALGRTIALGIVTRVIEEQQD
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagtaagttatggaattgattatgatgaagactacgatgactatgaagat
tatgattatgataatgaccatgattttgacgtagaagatgatggcaagccacctcagtca
aagcaaggaactacaaagcgtgggatttggagttgttccatttgcacttatgataatgat
gagagtttctctgcatgtgatatttgtggggttcttcgtaatccgttgattaatgctggc
accaatagggataagcaaacagttgagggcatgtgcaaagattctggagcatccaaaatg
gccacttctctatttgcatcattgccgcaacggatacccgaaacggatgtattgtttcaa
aagcagaatgatgtttttgtgaaggaagagggcaataactcccacaggcatatgaatatc
caaggacaatttcatgaattccataaggcttttagtacttgtagccatcaccatgttaat
ataggtccgcacatgtctgaaaacaggatgtggatctatagaactagaataaacattcct
cttgtagcctctttcaagtttgatgttccatccccagatgatttggtttctaatggattg
cgctctgccaaaatgggttcaaaagtcaactctgcggacttgaaatcttcaagagtttcc
tcaagcatcactgagaagaatggtctacttaatacaaaagcaagtgctgaaaagttggat
atctcatcttcgttgatgcgaaaaggcagacaagatacttttgatgacagcaatcattcg
aagaacagagctcataatatacaatcgagtgtaaaagtttcggatagctcattggaaact
atgccaaaacattacaatgtcgacgcaagcaataattcgaagaatgatagaggaaacaaa
ctatcgagtgataaatgctctgataactcacctgcattgaatctaaaaggcagacatgat
agaatagatgagagcagtagttcttcagtgagtgggggcaagccagaaagccttaccaat
agtttgaataaaagggctttgggtgttggttctgggttttcaaataatgttaatgctaca
gtcactcattcaaaggaacagtataaacctgaaaagtggatgctccctgaccaagctgaa
gatacattgacacaactgaatcttgcgattgttggtcatgttgattctggaaaatcaaca
ctctctggtagactactacacctcttgggccgaatatcccaaaaagagatgcacaaatat
gaaaaggaggcaaagatacagggcaaagggtcctttgcttatgcctgggcattggatgag
agcactgaagagagggaaaggggaataactatgacagtgggtgttgcttattttgattcc
aaaaagtatcatgttgttgtgcttgactcaccaggccataaggattttgttccgaacatg
atatctggagcaacacaagctgatgctgcaattcttgtcatagatgcctcgtttggtgca
tttgaagctggtatggacaatgctaaggggcaaacacgggagcacgcacaacttatcaga
agttttggtgttgatcaaattatagttgtgattaacaaaatggatgccgtggattactca
aaggaacggtttgatttgattaaacaacaacttggaacctttctacgtacttgtgggttt
agagattctcttatatcatggatcccattgagtgccatggaaaatcaaaatttggtggct
gctccttctgatgttcgtctgctgtcctggtatcgtggaccttatttgctggatgcaatt
gattccctccaacctcccacaagagatttctcaaagcccctagttatgcctatatgtgat
gttattaagttgcctacaatggggcaggtgtgcgcctgtggtaaactagaagctggagct
cttcggagtggatccaaggttctagttatgccgtcaggaaatgtagggtcggtacgttcc
ttagaacgcgactctcaggcttgtacacttgcaagagctggagacaatgtgactgttggt
cttcaaggcattgatgggggccatgtgatggctgggggggtgctatgtcaccctgatttt
cctgttgctatttccaaacatttggaactgaaggtccttgttttggatgttacaaccccg
atattgattggctctcagttggagtttcatgtacaccatgcaaaggaagctgcaagagtt
gtcagaatagtgtctttacttgatccaaagactggcaaggtgacaaagaaggcacctcgc
tgccttactgcaaagcaaagtgcagttattgaggtggctttgcaaggacccgtgtgtgtg
gacgagttttcaagttgtagagctcttgggagggcgtctctaagagcattaggaagaaca
attgctctcgggatcgtaacccgagtaatcgaggagcagcaggattag
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